Gene omics information

Query gene ID Zm.9712.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6077.8Zm.9712.1.A1_atBM336467--9e-2At5g25810tny (TINY)S.X.H.G.
0.4048.5Zm.8293.1.S1_atCF626174harpin-induced protein-7e-1At1g74560NRP1 (NAP1-RELATED PROTEIN 1)S.X.H.G.
0.3233.4Zm.8292.1.S1_atAY106611.1hypothetical protein LOC100275334-6e-15At4g16450unknown proteinS.X.H.G.
0.169.4Zm.1039.2.A1_atCF384547--2e+0At3g59270syntaxin-related family proteinS.X.H.G.
0.158.6Zm.9804.1.A1_atCD956095--4e+0At3g2223060S ribosomal protein L27 (RPL27B)S.X.H.G.
0.158.6Zm.9405.1.A1_atBM336416--1e-1At1g54970ATPRP1 (PROLINE-RICH PROTEIN 1)S.X.H.G.
0.136.8Zm.13559.2.A1_a_atBM333883--5e+0At4g23380unknown proteinS.X.H.G.
0.104.6ZmAffx.1033.1.A1_atAI881710--8e-1At1g12064unknown proteinS.X.H.G.
0.051.9Zm.8772.1.A1_atCF018678hypothetical protein LOC100192757-2e-38At5g54080HGO (HOMOGENTISATE 1,2-DIOXYGENASE)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
36.099.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
32.699.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
30.299.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.999.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.599.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.399.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.799.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.399.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.699.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.695.2GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-136Zm.6882.2.A1_atBG837779hypothetical protein LOC100191938-4e-2At1g0110060S acidic ribosomal protein P1 (RPP1A)C.G.S.X.
0.036e-134Zm.9472.1.A1_atCF006768hypothetical protein LOC100276276-6e-6At5g23760heavy-metal-associated domain-containing proteinC.G.S.X.
0.016e-134Zm.18133.1.A1_atAY103981.1--8e-38At1g78570RHM1 (RHAMNOSE BIOSYNTHESIS 1)C.G.S.X.
0.016e-134Zm.18133.1.S1_atAY103981.1--8e-38At1g78570RHM1 (RHAMNOSE BIOSYNTHESIS 1)C.G.S.X.
0.012e+032ZmAffx.12.1.S1_atAY562491.1kaurene synthase2-1e-7At4g02780GA1 (GA REQUIRING 1)C.G.S.X.
0.022e+032Zm.8909.1.A1_atCF636488hypothetical protein LOC100275937 /// hypothetical protein LOC100278999-1e-1At5g36662-C.G.S.X.
0.022e+032Zm.4453.1.S1_atAI714926Hypothetical protein LOC100194310-6e-20At2g01220nucleotidyltransferaseC.G.S.X.
0.012e+032Zm.16923.1.A1_atAI374569hypothetical protein LOC100193833-7e-36At2g34430LHB1B1C.G.S.X.
0.022e+032Zm.15995.1.A1_a_atAI666121peptidyl-prolyl cis-trans isomerase CYP19-4-1e-48At2g29960CYP5 (CYCLOPHILIN 5)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.039e-238Arabidopsis thalianaAt5g25810832650tny (TINY)encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family (TINY). The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Ectopic or overexpression of this gene in a Ds tagged line has reduced cell expansion. The expression of this gene is induced by ethylene and light and appears to stimulate cytokinin biosynthesis.---C.G.S.X.
0.033e-240Glycine maxGmaAffx.22372.1.S1_atCD401350--2e-24At3g56290unknown proteinC.G.S.X.
0.033e+032Hordeum vulgareContig9996_atContig9996--1e+0At3g18460unknown proteinC.G.S.X.
0.141e-1791Oryza sativaOs04g0403400AK120071.1-Conserved hypothetical protein3e-5At5g07400forkhead-associated domain-containing protein / FHA domain-containing proteinC.G.S.X.
0.045e-136Populus trichocarpaPtpAffx.216189.1.S1_s_atpmrna30808hypothetical protein-7e-4At4g39700heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedC.G.S.X.
0.039e-238Triticum aestivumTaAffx.50281.1.S1_atCA743314--4e+0At3g62840-C.G.S.X.
0.052e-342Vitis vinifera1619140_atCF606031hypothetical protein LOC100246049-4e-4At2g35270DNA-binding protein-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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