CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.9703.1.A1_at

Gene name hypothetical protein LOC100191161 /// hypothetical protein LOC100272965

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.57 75.1 Zm.9703.1.A1_at BM348340 hypothetical protein LOC100191161 /// hypothetical protein LOC100272965 - 5e+0 Atcg01020 - S.X. H.G.
0.73 89.9 Zm.6684.1.S1_a_at CF019431 60S ribosomal protein L29 - 4e-19 At3g06700 60S ribosomal protein L29 (RPL29A) S.X. H.G.
0.63 81.1 Zm.11664.2.A1_a_at CF628142 hypothetical protein LOC100278684 - 1e+0 At5g06030 self-incompatibility protein-related S.X. H.G.
0.29 28.1 Zm.5755.1.A1_at AI834089 - - 2e-4 At1g30820 CTP synthase, putative / UTP--ammonia ligase, putative S.X. H.G.
0.25 21.3 Zm.11802.2.A1_at BM380871 - - 1e+0 At5g25940 early nodulin-related S.X. H.G.
0.12 5.9 Zm.17082.1.S1_s_at AY108221.1 - - 4e-12 At4g23650 CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6) S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
31.1 99.8 GSM205423 B73xMo17 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
29.8 99.8 GSM205421 B73 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
26.1 99.6 GSM205422 Mo17xB73 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
26.0 99.6 GSM205433 B73 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
24.3 99.6 GSM205425 B73 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
20.8 99.4 GSM205436 B73xMo17 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
15.9 99.0 GSM205429 B73xMo17 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
15.6 99.0 GSM205434 Mo17xB73 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
11.9 98.6 GSM205374 B73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
11.6 98.6 GSM205376 B73xMo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 4e-2 38 ZmAffx.822.1.A1_at AI770502 - - 2e-1 At5g47600 heat shock protein-related C.G. S.X.
0.04 4e-2 38 ZmAffx.822.1.S1_at AI770502 - - 2e-1 At5g47600 heat shock protein-related C.G. S.X.
0.02 4e-2 38 Zm.3077.1.A1_at CF637365 calmodulin - 4e-82 At5g37780 CAM1 (CALMODULIN 1) C.G. S.X.
0.02 4e-2 38 Zm.3077.1.A1_a_at CF637365 calmodulin - 4e-82 At5g37780 CAM1 (CALMODULIN 1) C.G. S.X.
0.03 4e-2 38 Zm.19226.1.A1_at BI396135 hypothetical protein LOC100193127 - 5e+0 At5g55570 unknown protein C.G. S.X.
0.03 5e-1 34 Zm.7538.1.A1_at BM337034 hypothetical protein LOC100277956 - 1e+0 At4g03630 root nodule development protein-related C.G. S.X.
0.04 5e-1 34 Zm.4410.1.S1_at AI714715 hypothetical protein LOC100276528 - 7e-1 At2g36026 - C.G. S.X.
0.01 5e-1 34 Zm.2553.1.A1_a_at BQ619023 NADP-dependent malic enzyme - 5e-37 At5g11670 ATNADP-ME2 (NADP-malic enzyme 2) C.G. S.X.
0.01 5e-1 34 Zm.14274.1.A1_at AI065905 cell division cycle 2-like protein kinase 6 - 2e-17 At5g63610 CDKE C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 5e+0 32 Arabidopsis thaliana Atcg01020 - - encodes a chloroplast ribosomal protein L32, a constituent of the large subunit of the ribosomal complex - - - C.G. S.X.
0.09 2e-3 44 Glycine max GmaAffx.45741.1.S1_at BQ786295 - - 2e-1 At1g67910 unknown protein C.G. S.X.
0.10 7e-16 83 Hordeum vulgare Contig13145_at Contig13145 - - 6e+0 At1g24577 unknown protein C.G. S.X.
0.06 7e-10 65 Oryza sativa Os02g0799600 AK063712.1 - Conserved hypothetical protein 8e-2 At5g23100 unknown protein C.G. S.X.
0.04 3e-2 40 Populus trichocarpa PtpAffx.220607.1.S1_at pmrna37012 hypothetical protein - 9e-1 At5g38000 NADP-dependent oxidoreductase, putative C.G. S.X.
0.11 3e-20 99 Triticum aestivum TaAffx.16911.2.S1_at CA709804 - - 4e+0 At4g12720 NUDT7 C.G. S.X.
0.03 6e+0 30 Vitis vinifera 1618482_x_at CF203697.1 - - 2e+0 At5g50370 adenylate kinase, putative C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage