CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.97.1.S1_at

Gene name Eukaryotic initiation factor-5

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.56 74.4 Zm.97.1.S1_at BM073786 Eukaryotic initiation factor-5 - 1e-24 At1g36730 eukaryotic translation initiation factor 5, putative / eIF-5, putative S.X. H.G.
0.31 31.6 Zm.113.1.A1_at AY109382.1 homeobox3 - 3e+0 At3g19510 HAT3.1 S.X. H.G.
0.11 5.3 Zm.16377.1.A1_at CF349080 - - 2e+0 At3g20555 unknown protein S.X. H.G.
0.09 4.0 Zm.9351.1.A1_a_at CF630860 transport protein particle component, Bet3 containing protein /// transport protein particle component, Bet3 containing protein /// transport protein particle component, Bet3 containing protein - 4e-20 At3g05000 transport protein particle (TRAPP) component Bet3 family protein S.X. H.G.
0.08 3.4 Zm.9425.2.A1_x_at BM350860 hypothetical protein LOC100274829 - 9e-1 At2g35430 zinc finger (CCCH-type) family protein S.X. H.G.
0.05 1.9 Zm.2821.1.A1_s_at BM351274 hypothetical protein LOC100278693 - 2e+0 At2g28510 Dof-type zinc finger domain-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.5 95.1 GSM253280 ZM_8d_SG200_3Alu_I GSE10023 Maize gene expression during infection with Ustilago maydis
3.4 94.9 GSM253282 ZM_8d_SG200_3Alu_III GSE10023 Maize gene expression during infection with Ustilago maydis
3.2 94.5 GSM253281 ZM_8d_SG200_3Alu_II GSE10023 Maize gene expression during infection with Ustilago maydis
3.2 94.5 GSM206330 Lower pulvinus 2 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.1 94.3 GSM162267 Mutant 1 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
2.9 93.8 GSM253274 ZM_8d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
2.8 93.5 GSM206304 Upper pulvinus 60 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
2.6 92.9 GSM206305 Right pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
2.6 92.9 GSM206324 Upper pulvinus 2 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
2.5 92.6 GSM162266 Wild type 2 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.35 0 652 Zm.3489.1.A1_at AW433407 - - 2e+0 At5g29613 unknown protein C.G. S.X.
0.02 3e-5 50 Zm.8854.1.A1_at BM332798 - - 4e-1 At5g05987 PRA1.A2 (PRENYLATED RAB ACCEPTOR 1.A2) C.G. S.X.
0.02 3e-5 50 Zm.7054.1.S1_at BM331766 actin-depolymerizing factor 6 - 6e-4 At5g59890 ADF4 (ACTIN DEPOLYMERIZING FACTOR 4) C.G. S.X.
0.02 3e-5 50 Zm.6203.2.A1_a_at CF637772 putative glutathione peroxidase - 2e-40 At4g11600 ATGPX6 (GLUTATHIONE PEROXIDASE 6) C.G. S.X.
0.02 3e-5 50 Zm.4834.1.S1_at CF602448 hypothetical protein LOC100279345 - 4e+0 At5g26890 unknown protein C.G. S.X.
0.01 3e-5 50 Zm.4515.1.S1_at CO528625 hypothetical protein LOC100272651 - 2e-2 At1g79090 unknown protein C.G. S.X.
0.02 3e-5 50 Zm.2684.1.A1_at AW066853 - - 3e+0 At1g49510 emb1273 (embryo defective 1273) C.G. S.X.
0.02 3e-5 50 Zm.2591.2.A1_a_at BG836981 autophagy-related 8b - 2e-52 At1g62040 ATG8C (autophagy 8c) C.G. S.X.
0.02 3e-5 50 Zm.17852.1.S1_at CK786838 - - 2e+1 At5g17570 tatD-related deoxyribonuclease family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.26 1e-24 115 Arabidopsis thaliana At1g36730 840582 eukaryotic translation initiation factor 5, putative / eIF-5, putative F:binding, translation initiation factor activity;P:translational initiation, regulation of translational initiation;C:unknown;OMFBPAV - - - C.G. S.X.
0.28 1e-34 149 Glycine max GmaAffx.75978.3.S1_s_at CA937876 - - 2e-35 At1g36730 eukaryotic translation initiation factor 5, putative / eIF-5, putative C.G. S.X.
0.48 4e-162 571 Hordeum vulgare Contig2883_s_at Contig2883 - - 5e-15 At1g77840 eukaryotic translation initiation factor 5, putative / eIF-5, putative C.G. S.X.
0.40 1e-158 561 Oryza sativa Os09g0326900 AK067685.1 - - 7e-36 At1g36730 eukaryotic translation initiation factor 5, putative / eIF-5, putative C.G. S.X.
0.23 3e-51 204 Populus trichocarpa PtpAffx.4950.1.S1_at AJ779286 hypothetical protein - 2e-54 At1g36730 eukaryotic translation initiation factor 5, putative / eIF-5, putative C.G. S.X.
0.40 2e-134 480 Triticum aestivum Ta.3372.1.S1_at BJ275823 Translation initiation factor eIF5 - 6e-27 At1g36730 eukaryotic translation initiation factor 5, putative / eIF-5, putative C.G. S.X.
0.26 4e-53 208 Vitis vinifera 1619176_at CF519067 hypothetical protein LOC100262554 - 5e-61 At1g36730 eukaryotic translation initiation factor 5, putative / eIF-5, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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