Gene omics information

Query gene ID Zm.9560.1.A1_at
Gene name m17 protein
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5065.7Zm.9560.1.A1_atBM382073m17 protein-3e-2At1g77080-S.X.H.G.
0.7389.9Zm.18045.1.A1_atBM080270--8e-4At1g22180SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinS.X.H.G.
0.6381.1Zm.4883.1.A1_atAY107709.1Hypothetical protein LOC100216906-2e-5At1g07530SCL14 (SCARECROW-LIKE 14)S.X.H.G.
0.6077.8Zm.15194.1.A1_atBM334114--4e+0At1g16025unknown proteinS.X.H.G.
0.6077.8Zm.14136.1.A1_atAY104147.1hypothetical protein LOC100193727-1e-21At1g27340F-box family proteinS.X.H.G.
0.5775.1Zm.6453.1.S1_atAY106427.1--3e-1At5g33390glycine-rich proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
32.199.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
28.699.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.399.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.199.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.099.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.699.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.299.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.999.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.698.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.198.0GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.125e-30131Zm.336.2.A1_a_atAW055920Zea mays MADS29-2e+0At4g37940AGL21C.G.S.X.
0.091e-27123Zm.14826.1.A1_atAJ430637.1m23 protein-2e-16At4g18960AG (AGAMOUS)C.G.S.X.
0.091e-27123Zm.14826.1.S1_atAJ430637.1m23 protein-2e-16At2g42830SHP2 (SHATTERPROOF 2)C.G.S.X.
0.088e-26117Zm.336.1.S1_atAW144867ER6 protein /// Zea mays MADS29-2e-1At1g09740ethylene-responsive protein, putativeC.G.S.X.
0.138e-26117Zm.335.1.S1_a_atBM078498Zea mays MADS16-3e-2At3g57390AGL18C.G.S.X.
0.085e-24111Zm.524.1.S1_atAF112149.1MADS box protein 2-6e-17At3g57230AGL16 (AGAMOUS-LIKE 16)C.G.S.X.
0.092e-23109Zm.3907.1.S1_atL81162.2AGAMOUS-like protein /// M2 protein-3e-15At4g18960AG (AGAMOUS)C.G.S.X.
0.071e-21103Zm.292.1.S1_atL46397.1MADS box protein-2e-7At3g61120AGL13 (AGAMOUS-LIKE 13)C.G.S.X.
0.072e-2099Zm.293.1.S1_atL46398.1MADS box protein-3e-3At3g61120AGL13 (AGAMOUS-LIKE 13)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-240Arabidopsis thalianaAt1g77080844042-----C.G.S.X.
0.061e-552Glycine maxGmaAffx.7093.1.S1_atBM092487--3e-21At3g58780SHP1 (SHATTERPROOF 1)C.G.S.X.
0.153e-1995Hordeum vulgareContig24884_atContig24884--1e-1At5g10140FLC (FLOWERING LOCUS C)C.G.S.X.
0.452e-144513Oryza sativaOs02g0170300AK109522.1-MADS box protein ZMM174e-5At5g51870AGL71 (AGAMOUS-LIKE 71)C.G.S.X.
0.045e-240Populus trichocarpaPtpAffx.201624.1.S1_atpmrna3215--2e-15At3g54340AP3 (APETALA 3)C.G.S.X.
0.502e-154545Triticum aestivumTa.27569.1.A1_atCD890142MADS-box transcription factor TaAGL35-8e-2At5g51870AGL71 (AGAMOUS-LIKE 71)C.G.S.X.
0.051e-859Vitis vinifera1614418_atCF414182flowering-related B-class MADS-box protein-9e-15At3g54340AP3 (APETALA 3)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage