CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.9503.1.A1_at

Gene name hypothetical protein LOC100191795

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 85.8 Zm.9503.1.A1_at BM269403 hypothetical protein LOC100191795 - 2e-3 At1g63700 YDA (YODA) S.X. H.G.
0.33 36.0 Zm.17235.1.S1_at CK827663 - - 1e+1 At5g07560 GRP20 (GLYCINE-RICH PROTEIN 20) S.X. H.G.
0.29 28.1 Zm.5507.1.S1_at CN071496 - - 5e+0 At5g02420 unknown protein S.X. H.G.
0.29 28.1 Zm.2812.1.S1_at AW067476 - - 3e+0 At3g48020 - S.X. H.G.
0.29 28.1 Zm.770.1.A1_at CF058911 - - 2e-1 At5g14970 unknown protein S.X. H.G.
0.27 24.6 Zm.15899.2.A1_x_at BM334937 hypothetical protein LOC100193182 - 5e-1 At1g56555 unknown protein S.X. H.G.
0.27 24.6 Zm.13251.1.A1_at AI737641 sugary1 - 1e-37 At2g39930 ISA1 (ISOAMYLASE 1) S.X. H.G.
0.26 22.7 Zm.5466.3.A1_at AI665910 hypothetical protein LOC100276605 - 9e-2 At1g20450 ERD10 (EARLY RESPONSIVE TO DEHYDRATION 10) S.X. H.G.
0.17 10.6 Zm.46.1.A1_s_at BM351264 glutamine synthetase4 /// glutamine synthetase5 - 3e-43 At3g17820 ATGSKB6 S.X. H.G.
0.15 8.6 Zm.13208.1.S1_at CA402017 protein binding protein - 2e-1 At1g07000 ATEXO70B2 (exocyst subunit EXO70 family protein B2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.2 98.2 GSM320445 protocol: mRNA - genotype: CML69 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.0 98.0 GSM320446 protocol: mRNA - genotype: CML69 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.4 97.8 GSM320442 protocol: mRNA - genotype: Mo17 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1 97.7 GSM253280 ZM_8d_SG200_3Alu_I GSE10023 Maize gene expression during infection with Ustilago maydis
5.8 97.2 GSM253281 ZM_8d_SG200_3Alu_II GSE10023 Maize gene expression during infection with Ustilago maydis
5.6 97.1 GSM320441 protocol: mRNA - genotype: Mo17 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.5 97.1 GSM206332 Lower pulvinus 15 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.2 96.9 GSM253282 ZM_8d_SG200_3Alu_III GSE10023 Maize gene expression during infection with Ustilago maydis
4.8 96.6 GSM375788 Deep-sowing 10d treatment Control, biological rep1 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
4.8 96.6 GSM375795 Deep-sowing 10d treatment Control, biological rep2 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e-5 50 Zm.5053.1.A1_at CO533193 - - 2e-7 At5g66850 MAPKKK5 C.G. S.X.
0.05 6e-2 38 Zm.5107.1.A1_at BM266614 hypothetical protein LOC100191147 - 1e-1 At4g17280 - C.G. S.X.
0.01 2e-1 36 Zm.2704.1.S1_a_at AW066934 - - 2e-44 At3g44850 protein kinase-related C.G. S.X.
0.01 2e-1 36 Zm.2704.1.S1_at AW066934 - - 2e-44 At3g44850 protein kinase-related C.G. S.X.
0.01 9e-1 34 Zm.5428.1.S1_at AI855040 ubiquitin-like 1-activating enzyme E1A - 8e-1 At4g24940 SAE1A (SUMO-ACTIVATING ENZYME 1A) C.G. S.X.
0.01 9e-1 34 Zm.2864.1.S1_at CA828566 nucleotide-binding protein 1 - 4e-33 At5g50960 NBP35 (NUCLEOTIDE BINDING PROTEIN 35) C.G. S.X.
0.01 9e-1 34 Zm.14413.1.A1_at CF052725 hypothetical protein LOC100279243 - 1e-21 At5g10270 CDKC C.G. S.X.
0.01 9e-1 34 Zm.1158.1.A1_at AY107067.1 - - 4e-31 At5g10270 CDKC C.G. S.X.
0.01 4e+0 32 Zm.7863.1.S1_at BM080209 hypothetical protein LOC100274181 - 2e-7 At3g56720 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 2e-3 44 Arabidopsis thaliana At1g63700 842674 YDA (YODA) member of MEKK subfamily, a component of the stomatal development regulatory pathway. - - - C.G. S.X.
0.15 2e-25 117 Glycine max Gma.633.2.S1_x_at BQ741155 - - 3e-52 At1g53570 MAP3KA C.G. S.X.
0.02 3e-1 36 Hordeum vulgare Contig8969_at Contig8969 - - 1e+0 At4g33560 unknown protein C.G. S.X.
0.33 4e-114 412 Oryza sativa Os11g0207200 AK120290.1 - - 4e-7 At1g53570 MAP3KA C.G. S.X.
0.14 5e-8 59 Populus trichocarpa PtpAffx.201823.1.S1_at pmrna3634 - - 3e-13 At1g53570 MAP3KA C.G. S.X.
0.92 0 1570 Triticum aestivum Ta.16379.1.S1_at CA617365 - - 2e-3 At1g63700 YDA (YODA) C.G. S.X.
0.08 3e-15 81 Vitis vinifera 1610796_at CB006117 hypothetical protein LOC100243772 - 2e-18 At1g53570 MAP3KA C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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