Gene omics information

Query gene ID Zm.9389.1.A1_a_at
Gene name catalytic/ protein phosphatase type 2C
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9699.8Zm.9389.1.A1_a_atCO524440catalytic/ protein phosphatase type 2C-6e+0At5g5671060S ribosomal protein L31 (RPL31C)S.X.H.G.
0.4658.4Zm.6119.1.A1_atAY105312.1--4e-3At2g28380DRB2 (DSRNA-BINDING PROTEIN 2)S.X.H.G.
0.3742.3Zm.18808.1.A1_atCO526738--1e+0At1g02840SR1S.X.H.G.
0.3641.3Zm.13551.1.A1_atAY108205.1--2e+0At2g33870ArRABA1h (Arabidopsis Rab GTPase homolog A1h)S.X.H.G.
0.3437.2Zm.777.1.S1_a_atCD442368hypothetical protein LOC100272376-4e-8At5g633804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinS.X.H.G.
0.3233.4Zm.17818.1.A1_atCK145213--6e+0At5g52470FIB1 (FIBRILLARIN 1)S.X.H.G.
0.3233.4Zm.7727.1.S1_s_atCK986121polyubiquitin containing 7 ubiquitin monomers /// ubiquitin /// polyubiquitin-5e-129At5g20620UBQ4S.X.H.G.
0.3233.4Zm.8181.1.A1_atBE643624hypothetical protein LOC100193608-2e-1At1g043502-oxoglutarate-dependent dioxygenase, putativeS.X.H.G.
0.3131.6Zm.3169.5.S1_x_atAI739763minichromosome maintenance protein-1e-1At5g44635minichromosome maintenance family protein / MCM family proteinS.X.H.G.
0.3131.6Zm.9905.1.A1_atAY107944.1IDP680 protein /// hypothetical protein LOC100275890 /// RAB5-interacting protein-8e+0At5g66490unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.998.7GSM320442protocol: mRNA - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.098.2GSM253272ZM_4.5d_SG200_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
8.498.1GSM320441protocol: mRNA - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.797.9GSM253273ZM_4.5d_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
6.397.4GSM253271ZM_4.5d_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
5.697.1GSM320445protocol: mRNA - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.796.5GSM320446protocol: mRNA - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.995.7GSM320438protocol: mRNA - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.494.9GSM320439protocol: mRNA - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.394.7GSM206331Lower pulvinus 5 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9601128Zm.9389.1.A1_x_atCO524440catalytic/ protein phosphatase type 2C-6e+0At5g5671060S ribosomal protein L31 (RPL31C)C.G.S.X.
0.660765Zm.9389.2.A1_x_atBQ538340catalytic/ protein phosphatase type 2C-1e+0Atmg00980-C.G.S.X.
0.537e-164575Zm.9389.3.A1_atCF633932--4e+0At5g43410ethylene-responsive factor, putativeC.G.S.X.
0.537e-164575Zm.9389.3.A1_a_atCF633932catalytic/ protein phosphatase type 2C-4e+0At5g43410ethylene-responsive factor, putativeC.G.S.X.
0.537e-164575Zm.9389.3.A1_x_atCF633932--4e+0At5g43410ethylene-responsive factor, putativeC.G.S.X.
0.026e-134Zm.148.1.S1_atL14835.1hypothetical LOC542242-2e+0At3g49570LSU3 (RESPONSE TO LOW SULFUR 3)C.G.S.X.
0.022e+032Zm.16504.1.A1_atX54076.1heat shock protein18f-3e+1At5g04030unknown proteinC.G.S.X.
0.022e+032Zm.1620.1.A1_atAY111010.1--1e-1At4g14780protein kinase, putativeC.G.S.X.
0.022e+032Zm.1620.1.S1_atBE640636--1e-1At4g14780protein kinase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.046e+032Arabidopsis thalianaAt5g5671083577260S ribosomal protein L31 (RPL31C)F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic ribosome, cytosolic large ribosomal subunit, ribosome, cell wall;MOPAFB---C.G.S.X.
0.038e+032Glycine maxPsAffx.psMA008xM23f_s_atPsAffx.psMA008xM23f--3e+0At1g02160-C.G.S.X.
0.379e-59226Hordeum vulgareContig20162_atContig20162--2e+0At5g39650unknown proteinC.G.S.X.
0.222e-38161Oryza sativaOs.13973.3.S1_at---0C.G.S.X.
0.038e+032Populus trichocarpaPtpAffx.116727.1.A1_atCK090798--1e-2At5g35470unknown proteinC.G.S.X.
0.292e-39163Triticum aestivumTaAffx.90915.1.S1_atBJ275985--4e-2At5g27930protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
0.032e+032Vitis vinifera1613446_atCF405907--3e+0At5g59050unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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