Gene omics information

Query gene ID	Zm.9358.1.A1_at
Gene name	hypothetical protein LOC100191697
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.92	99.2	Zm.9358.1.A1_at	BM348583	hypothetical protein LOC100191697	-	1e+0	At3g12190	-	S.X.	H.G.	Please select
0.20	14.2	Zm.9810.1.A1_at	BM332775	-	-	6e-2	At4g05340	ATP binding	S.X.	H.G.	Please select
0.06	2.3	Zm.10652.1.S1_at	CN844569	hypothetical protein LOC100191856	-	4e-2	At1g23040	hydroxyproline-rich glycoprotein family protein	S.X.	H.G.	Please select
0.05	1.9	Zm.2976.1.S1_at	AF045033.1	nitrate-induced NOI protein	-	2e-3	At2g04410	-	S.X.	H.G.	Please select
0.04	1.5	Zm.12930.1.S1_at	CA403471	hypothetical protein LOC100191377	-	3e-3	At4g31790	diphthine synthase, putative (DPH5)	S.X.	H.G.	Please select
0.02	0.7	Zm.13644.1.A1_at	CA400732	hypothetical protein LOC100274042	-	9e-7	At3g05910	pectinacetylesterase, putative	S.X.	H.G.	Please select
0.01	0.3	Zm.5065.1.S1_s_at	BM318796	Diacylglycerol kinase 1	-	9e+0	At2g39630	glycosyl transferase family 2 protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
21.2	99.4	GSM258174	B84 11-day seedling aerial tissue biological replicate 1	GSE10236	Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
15.5	99.0	GSM320439	protocol: mRNA - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.8	98.9	GSM258201	Wf9 11-day seedling aerial tissue biological replicate 1	GSE10237	Gene expression variation among eight maize inbreds
11.8	98.6	GSM320438	protocol: mRNA - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.1	98.4	GSM258192	B84 11-day seedling aerial tissue biological replicate 3	GSE10236	Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
8.8	98.1	GSM258178	B84xB73 11-day seedling aerial tissue biological replicate 1	GSE10236	Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
7.2	97.8	GSM320440	protocol: mRNA - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4	97.0	GSM206317	Right pulvinus control total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.5	96.3	GSM258199	B14a 11-day seedling aerial tissue biological replicate 1	GSE10237	Gene expression variation among eight maize inbreds
4.2	96.0	GSM206311	Left pulvinus control total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e+0	32	Zm.9636.1.A1_at	BM349325	-	-	2e+1	At5g67510	60S ribosomal protein L26 (RPL26B)	C.G.	S.X.	Please select
0.02	2e+0	32	Zm.6967.1.A1_at	CF631968	Hypothetical protein LOC606455	-	7e+0	At3g52710	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	32	Zm.15545.1.S1_s_at	CD219247	-	-	5e+0	At3g48800	sterile alpha motif (SAM) domain-containing protein	C.G.	S.X.	Please select
0.03	2e+0	32	Zm.15545.1.S1_at	CD219247	-	-	5e+0	At3g48800	sterile alpha motif (SAM) domain-containing protein	C.G.	S.X.	Please select
0.01	2e+0	32	Zm.13329.1.S1_at	CF646744	hypothetical protein LOC100279416	-	3e-16	At1g72250	kinesin motor protein-related	C.G.	S.X.	Please select
0.02	2e+0	32	Zm.12789.1.A1_at	CA398899	-	-	9e-3	At3g04510	LSH2 (LIGHT SENSITIVE HYPOCOTYLS 2)	C.G.	S.X.	Please select
0.02	2e+0	32	Zm.11986.1.S1_at	CF632895	bifunctional aspartokinase/homoserine dehydrogenase	-	8e-7	At5g21060	homoserine dehydrogenase family protein	C.G.	S.X.	Please select
0.02	9e+0	30	Zm.9818.1.A1_at	BM339999	-	-	5e+0	At5g14000	anac084 (Arabidopsis NAC domain containing protein 84)	C.G.	S.X.	Please select
0.01	9e+0	30	Zm.8100.1.A1_at	AY107723.1	hypothetical protein LOC100192082	-	4e-2	At3g61110	ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e+0	34	Arabidopsis thaliana	At3g12190	820396	-	F:molecular_function unknown;P:biological_process unknown;C:unknown;MOBFPAV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	Gma.2564.1.S1_at	BU547192	-	-	1e-31	At5g02270	ATNAP9	C.G.	S.X.	Please select
0.04	3e+0	32	Hordeum vulgare	rbaal1b14_s_at	rbaal1b14	-	-	6e+0	At5g48080	-	C.G.	S.X.	Please select
0.03	3e+0	34	Oryza sativa	Os07g0674950	9635.m04822	-	-	4e+0	At5g07040	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e+0	34	Populus trichocarpa	PtpAffx.20330.1.A1_at	CK090219	-	-	1e+1	At5g64650	ribosomal protein L17 family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	6e+0	32	Triticum aestivum	TaAffx.7487.1.S1_at	CA657907	-	-	6e+0	At2g27315	unknown protein	C.G.	S.X.	Please select
0.03	1e-1	36	Vitis vinifera	1607660_at	CA812263	similar to ribosomal protein L17	-	6e-80	At1g04480	60S ribosomal protein L23 (RPL23A)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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