Gene omics information

Query gene ID Zm.9200.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.9200.1.A1_atBM336786--4e+0At3g45600TET3 (TETRASPANIN3)S.X.H.G.
0.6785.8ZmAffx.1339.1.S1_at11990232-87--1e-41Atcg01070-S.X.H.G.
0.5571.6ZmAffx.134.1.A1_atAI667702--3e+0At1g09220pentatricopeptide (PPR) repeat-containing proteinS.X.H.G.
0.4455.7ZmAffx.1462.1.S1_at11990232-29--0Atcg00480-S.X.H.G.
0.4352.8ZmAffx.1387.1.S1_at40794996-62--1e+1At5g04030unknown proteinS.X.H.G.
0.2724.6ZmAffx.1412.1.S1_at40794996-87--2e-139At2g07751NADH-ubiquinone oxidoreductase chain 3, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
31.599.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
28.799.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.599.7GSM320470protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.999.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.899.3GSM320458protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.599.0GSM320472protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.499.0GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.599.0GSM320466protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.098.7GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.098.5GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e-134Zm.14427.1.S1_atAY107341.1hypothetical protein LOC100216620-7e-4At4g20325unknown proteinC.G.S.X.
0.022e+032Zm.7035.1.A1_atCD446757hypothetical protein LOC100280000-3e+0At3g19130ATRBP47B (RNA-binding protein 47B)C.G.S.X.
0.012e+032Zm.3304.1.S1_atCF007162hypothetical protein LOC100191987-4e-3At5g10330HPA1 (HISTIDINOL PHOSPHATE AMINOTRANSFERASE 1)C.G.S.X.
0.032e+032Zm.19316.1.A1_atCO523375--1e+0At3g05860MADS-box protein (AGL45)C.G.S.X.
0.012e+032Zm.16923.1.A1_atAI374569hypothetical protein LOC100193833-7e-36At2g34430LHB1B1C.G.S.X.
0.037e+030Zm.9849.1.A1_atBM379884hypothetical protein LOC100192041-5e+0At4g03020transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.027e+030Zm.9014.2.A1_atAI714470PP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2-2e-68At2g42500PP2A-4C.G.S.X.
0.027e+030Zm.8724.1.A1_atBM350066--6e+0At5g58710ROC7C.G.S.X.
0.037e+030Zm.4406.2.A1_atAI881215--8e-4At1g34790TT1 (transparent testa 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e+032Arabidopsis thalianaAt3g45600823702TET3 (TETRASPANIN3)Member of TETRASPANIN family---C.G.S.X.
0.046e+032Glycine maxGmaAffx.79504.1.A1_atCD399379--3e+0At3g11405unknown proteinC.G.S.X.
0.032e+032Hordeum vulgareContig16785_atContig16785--1e+0At3g48330PIMT1 (PROTEIN-L-ISOASPARTATE METHYLTRANSFERASE 1)C.G.S.X.
0.055e-136Oryza sativaOsAffx.13414.1.S1_at---0C.G.S.X.
0.033e-136Populus trichocarpaPtpAffx.159837.1.A1_atCV257642--5e+0At5g38720unknown proteinC.G.S.X.
0.043e-136Triticum aestivumTa.30569.2.S1_atCA731172--3e-7At4g34030MCCB (3-METHYLCROTONYL-COA CARBOXYLASE)C.G.S.X.
0.033e-134Vitis vinifera1612448_atCA817520hypothetical protein LOC100256681-1e-10At2g17040anac036 (Arabidopsis NAC domain containing protein 36)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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