Gene omics information

Query gene ID	Zm.9152.1.A1_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.9152.1.A1_at	BM267500	-	-	4e+0	At1g65484	unknown protein	S.X.	H.G.	Please select
0.61	79.5	Zm.3731.1.A1_at	BM339633	hypothetical protein LOC100194030	-	6e+0	At5g60950	COBL5 (COBRA-LIKE PROTEIN 5 PRECURSOR)	S.X.	H.G.	Please select
0.61	79.5	Zm.17587.1.S1_at	CK369775	hypothetical protein LOC100193716 /// hypothetical protein LOC100276274	-	5e+0	At5g67420	LBD37 (LOB DOMAIN-CONTAINING PROTEIN 37)	S.X.	H.G.	Please select
0.36	41.3	Zm.1129.1.A1_at	BE510577	-	-	1e+0	At1g80730	ZFP1 (ZINC-FINGER PROTEIN 1)	S.X.	H.G.	Please select
0.29	28.1	Zm.12101.2.A1_at	AI833552	-	-	4e+0	At4g34412	-	S.X.	H.G.	Please select
0.25	21.3	Zm.14129.1.A1_a_at	AY104662.1	40S ribosomal protein S24	-	1e-22	At3g04920	40S ribosomal protein S24 (RPS24A)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
31.8	99.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
31.3	99.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.5	99.6	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.1	99.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.9	99.6	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.9	99.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.3	99.6	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.5	99.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.0	99.3	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.4	96.2	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	2e+0	32	Zm.8953.1.A1_at	AY104644.1	hypothetical protein LOC100280204	-	1e-3	At5g18630	lipase class 3 family protein	C.G.	S.X.	Please select
0.01	2e+0	32	Zm.6037.1.S1_a_at	CA403590	hypothetical protein LOC100272475	-	2e-14	At3g56150	EIF3C (EUKARYOTIC TRANSLATION INITIATION FACTOR 3C)	C.G.	S.X.	Please select
0.02	2e+0	32	Zm.5962.3.A1_at	AY107555.1	-	-	4e-48	At3g07020	UDP-glucose:sterol glucosyltransferase (UGT80A2)	C.G.	S.X.	Please select
0.02	2e+0	32	Zm.5962.3.S1_at	AY107555.1	-	-	4e-48	At3g07020	UDP-glucose:sterol glucosyltransferase (UGT80A2)	C.G.	S.X.	Please select
0.01	2e+0	32	Zm.5388.1.S1_at	AW453245	hypothetical protein LOC100193632	-	6e-23	At3g09180	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	Zm.1778.1.A1_at	AW438152	hypothetical protein LOC100277199	-	7e+0	At2g20453	unknown protein	C.G.	S.X.	Please select
0.01	2e+0	32	Zm.14473.1.A1_at	AI665307	-	-	1e-10	At2g23350	PAB4 (POLY(A) BINDING PROTEIN 4)	C.G.	S.X.	Please select
0.01	2e+0	32	Zm.14473.1.A1_a_at	AI665307	-	-	1e-10	At2g23350	PAB4 (POLY(A) BINDING PROTEIN 4)	C.G.	S.X.	Please select
0.02	2e+0	32	Zm.10292.1.A1_at	BM737261	-	-	6e-16	At2g40860	protein kinase family protein / protein phosphatase 2C ( PP2C) family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	4e+0	32	Arabidopsis thaliana	At1g65484	6240315	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e+0	34	Glycine max	PsAffx.psZS005xN14f_at	PsAffx.psZS005xN14f	-	-	8e-1	At3g43150	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	32	Hordeum vulgare	HE01F04u_s_at	HE01F04u	-	-	3e+0	At1g51913	unknown protein	C.G.	S.X.	Please select
0.03	9e+0	32	Oryza sativa	Os10g0182800	NM_195190.1	-	-	2e+0	At5g38160	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+1	30	Populus trichocarpa	PtpAffx.9573.1.S1_at	DN497809	hypothetical protein	-	7e-1	At5g40750	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	5e+0	32	Triticum aestivum	TaAffx.112205.1.S1_at	CA626060	-	-	4e+0	At2g36160	40S ribosomal protein S14 (RPS14A)	C.G.	S.X.	Please select
0.03	5e+0	30	Vitis vinifera	1617720_at	BQ792537	hypothetical protein LOC100256125	-	2e-11	At4g13400	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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