CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.9144.1.A1_at

Gene name copper chaperone for superoxide dismutase

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 65.7 Zm.9144.1.A1_at BM340758 copper chaperone for superoxide dismutase - 3e-5 At1g12520 ATCCS (COPPER CHAPERONE FOR SOD1) S.X. H.G.
0.27 24.6 Zm.17196.1.A1_at CK145300 - - 2e+0 At3g32160 unknown protein S.X. H.G.
0.23 18.6 Zm.12259.1.S1_at BQ578011 - - 3e-1 At2g25780 unknown protein S.X. H.G.
0.22 16.9 Zm.17695.1.S1_at CK370325 hypothetical protein LOC100272438 - 1e+1 At5g03455 CDC25 S.X. H.G.
0.08 3.4 Zm.14073.2.S1_a_at BM079646 60S ribosomal protein L28 - 6e-7 At2g19730 60S ribosomal protein L28 (RPL28A) S.X. H.G.
0.06 2.3 Zm.17757.1.S1_at CK371299 polygalacturonase inhibitor 1 - 1e+0 At3g44100 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.8 97.6 GSM162267 Mutant 1 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
4.8 96.6 GSM253260 ZM_2d_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
4.7 96.5 GSM253261 ZM_2d_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
4.5 96.3 GSM253265 ZM_4d_SG200_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
4.2 96.0 GSM253255 ZM_24h_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
4.1 95.9 GSM253267 ZM_4d_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
4.0 95.8 GSM162266 Wild type 2 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
3.9 95.7 GSM253253 ZM_24h_SG200_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
3.9 95.7 GSM323171 Zm_SG200Dpep1_24hpi_II GSE12892 Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
3.8 95.5 GSM253251 ZM_24h_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 3e-28 125 Zm.13007.1.S1_at CO532826 subtilisin-like protease - 2e-2 At5g67360 ARA12 C.G. S.X.
0.02 2e-1 36 Zm.2144.1.A1_at CF626427 - - 6e+0 At4g10112 unknown protein C.G. S.X.
0.03 7e-1 34 ZmAffx.611.1.A1_at AI715039 - - 1e+1 At5g13340 unknown protein C.G. S.X.
0.03 7e-1 34 ZmAffx.611.1.S1_at AI715039 - - 1e+1 At5g13340 unknown protein C.G. S.X.
0.01 3e+0 32 Zm.230.1.S1_at L33913.1 aspartate kinase homoserine dehydrogenase2 - 3e-26 At1g31230 AK-HSDH I (ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE I) C.G. S.X.
0.02 3e+0 32 Zm.1760.1.S1_at BG840980 hypothetical protein LOC100273326 - 2e+0 At5g45750 AtRABA1c (Arabidopsis Rab GTPase homolog A1c) C.G. S.X.
0.02 3e+0 32 Zm.1665.1.A1_at AW355870 - - 3e-1 At5g28800 unknown protein C.G. S.X.
0.02 3e+0 32 Zm.13856.1.A1_at AF439727.1 formate tetrahyrofolate ligase - 9e-58 At1g50480 THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE) C.G. S.X.
0.02 3e+0 32 Zm.13856.1.S1_at AF439727.1 formate tetrahyrofolate ligase - 9e-58 At1g50480 THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 3e-5 50 Arabidopsis thaliana At1g12520 837808 ATCCS (COPPER CHAPERONE FOR SOD1) Copper/zinc superoxide dismutase copper chaperone. Localized to the chloroplast. Expressed in roots and shoots. Up-regulated in response to copper and senescence. The AtACC activates all three CuZnSOD activities located in three different subcellular compartments. Contains three domains, central, ATX-1 like and C-terminal. ATX-1 like domain essential for the copper chaperone function of AtCCS in planta. - - - C.G. S.X.
0.18 1e-14 81 Glycine max Gma.8498.1.S1_at AF329816.1 Cu/Zn-superoxide dismutase copper chaperone precursor - 1e-14 At1g12520 ATCCS (COPPER CHAPERONE FOR SOD1) C.G. S.X.
0.03 8e-1 34 Hordeum vulgare HD10C22r_x_at HD10C22r - - 2e-3 At3g12130 KH domain-containing protein / zinc finger (CCCH type) family protein C.G. S.X.
0.21 1e-175 617 Oryza sativa Os04g0573200 AK120348.1 - Copper/Zinc superoxide dismutase family protein 4e-2 At1g12520 ATCCS (COPPER CHAPERONE FOR SOD1) C.G. S.X.
0.06 4e-2 40 Populus trichocarpa PtpAffx.2587.2.S1_at CF233078 - - 6e-20 At1g12520 ATCCS (COPPER CHAPERONE FOR SOD1) C.G. S.X.
0.51 2e-135 482 Triticum aestivum Ta.22744.1.S1_at CA719186 - - 1e-1 At4g22550 phosphatidic acid phosphatase-related / PAP2-related C.G. S.X.
0.22 9e-15 79 Vitis vinifera 1621822_at CF516639 hypothetical protein LOC100263358 - 6e-7 At1g12520 ATCCS (COPPER CHAPERONE FOR SOD1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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