Gene omics information

Query gene ID	Zm.9021.1.S1_at
Gene name	hypothetical protein LOC100192978
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	85.8	Zm.9021.1.S1_at	CO533021	hypothetical protein LOC100192978	-	8e-4	At5g22920	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.67	85.8	Zm.17688.1.S1_at	CK370167	-	-	2e-1	At1g72160	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein	S.X.	H.G.	Please select
0.29	28.1	ZmAffx.769.1.S1_at	AI746131	-	-	2e-1	At1g23465	signal peptidase-related	S.X.	H.G.	Please select
0.17	10.6	Zm.15295.1.A1_at	CK828159	hypothetical protein LOC100192805	-	4e-4	At3g02220	unknown protein	S.X.	H.G.	Please select
0.13	6.8	ZmAffx.561.1.A1_at	AI714590	hypothetical protein LOC100192917	-	3e+0	At4g36100	-	S.X.	H.G.	Please select
0.09	4.0	Zm.18518.1.A1_at	CF631091	hypothetical protein LOC100280282	-	1e-1	At2g02040	PTR2 (PEPTIDE TRANSPORTER 2)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
15.9	99.0	GSM205421	B73 19 DAP endosperm tissue biological replicate 1	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
13.9	98.8	GSM205425	B73 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
12.2	98.6	GSM205433	B73 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
9.8	98.3	GSM205436	B73xMo17 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
9.3	98.2	GSM205429	B73xMo17 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
8.4	98.1	GSM206307	Lower pulvinus 5 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
8.3	98.0	GSM206310	Lower pulvinus 60 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
7.2	97.8	GSM205423	B73xMo17 19 DAP endosperm tissue biological replicate 1	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
6.6	97.6	GSM206290	Upper pulvinus 15 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
6.4	97.5	GSM206289	Upper pulvinus 5 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.27	5e-37	155	Zm.8520.1.A1_at	BQ538104	hypothetical protein LOC100192089	-	1e+0	At5g22920	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.03	9e-5	48	Zm.6715.2.A1_at	BM337592	RING finger and CHY zinc finger domain-containing protein 1	-	3e-10	At5g25560	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.01	1e-3	44	Zm.3227.1.A1_at	CA399429	-	-	2e-8	At3g18290	EMB2454 (embryo defective 2454)	C.G.	S.X.	Please select
0.02	2e-2	40	Zm.5646.1.A1_a_at	BM347849	hypothetical protein LOC100191650	-	2e-25	At1g04760	ATVAMP726	C.G.	S.X.	Please select
0.01	2e-2	40	Zm.5646.2.A1_x_at	AW257823	hypothetical protein LOC100191650	-	3e-41	At1g04750	VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721)	C.G.	S.X.	Please select
0.01	8e-2	38	Zm.19212.1.A1_at	AY110394.1	-	-	1e-1	At1g06160	ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)	C.G.	S.X.	Please select
0.01	8e-2	38	Zm.19212.1.S1_at	BE238501	-	-	1e-1	At1g06160	ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)	C.G.	S.X.	Please select
0.01	8e-2	38	Zm.14041.1.A1_at	AY104522.1	-	-	1e+1	At4g19760	catalytic/ cation binding / chitinase/ hydrolase, hydrolyzing O-glycosyl compounds	C.G.	S.X.	Please select
0.01	8e-2	38	Zm.14041.1.S1_at	AY104522.1	-	-	1e+1	At4g19760	catalytic/ cation binding / chitinase/ hydrolase, hydrolyzing O-glycosyl compounds	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	8e-4	46	Arabidopsis thaliana	At5g22920	832356	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFBA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.12	5e-6	54	Glycine max	GmaAffx.86816.1.S1_at	BM139503	-	-	1e-16	At5g22920	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.40	5e-130	464	Hordeum vulgare	Contig2830_at	Contig2830	-	-	2e-4	At5g22920	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.41	5e-124	446	Oryza sativa	Os10g0456800	AK104810.1	-	CHY zinc finger domain containing protein	1e-2	At5g25560	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	5e-6	54	Populus trichocarpa	PtpAffx.95850.1.A1_at	CV230444	hypothetical protein	-	4e-1	At5g25560	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.37	4e-135	482	Triticum aestivum	Ta.2460.1.S1_x_at	BG905457	-	-	1e-2	At5g25560	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.02	6e-2	38	Vitis vinifera	1621565_s_at	CF516181	hypothetical protein LOC100252623	-	5e-70	At5g25560	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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