CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.8945.1.S1_at

Gene name

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 85.8 Zm.8945.1.S1_at AY103889.1 - - 2e-85 At5g18580 FASS (FASS 1) S.X. H.G.
0.67 85.8 Zm.16593.10.A1_a_at AI714631 - - 8e-7 At3g05230 signal peptidase subunit family protein S.X. H.G.
0.46 58.4 Zm.890.2.A1_a_at CA400673 GSDL-motif lipase - 5e+0 At5g55710 - S.X. H.G.
0.40 48.5 Zm.6681.1.A1_at BG837073 wound induced protein - 3e-1 At4g28240 wound-responsive protein-related S.X. H.G.
0.38 44.2 Zm.5950.1.A1_at BG837473 hypothetical protein LOC100216987 - 9e-3 At3g56480 myosin heavy chain-related S.X. H.G.
0.32 33.4 Zm.6146.1.A1_at CD989568 brassinosteroid biosynthesis-like protein - 1e-40 At3g19820 DWF1 (DWARF 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.4 96.2 GSM206310 Lower pulvinus 60 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.6 95.2 GSM206307 Lower pulvinus 5 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.6 95.2 GSM206303 Upper pulvinus 30 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.6 95.2 GSM206300 Upper pulvinus 2 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.5 95.1 GSM206299 Left pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.5 95.1 GSM206305 Right pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.3 94.7 GSM206304 Upper pulvinus 60 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.3 94.7 GSM206309 Lower pulvinus 30 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.1 94.3 GSM206306 Lower pulvinus 2 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
2.9 93.8 GSM206327 Upper pulvinus 30 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.31 0 755 Zm.8945.2.A1_at BM339385 - - 5e-25 At5g18580 FASS (FASS 1) C.G. S.X.
0.08 5e-47 188 Zm.9970.1.A1_at BM348066 - - 5e+0 At5g59040 COPT3 C.G. S.X.
0.01 3e-2 40 Zm.10807.1.S1_at AY106975.1 hypothetical protein LOC100280257 - 4e-19 At3g16060 kinesin motor family protein C.G. S.X.
0.02 2e+0 34 ZmAffx.1520.1.S1_at 11990232-57 - - 6e-66 Atcg00780 - C.G. S.X.
0.01 2e+0 34 ZmAffx.146.1.A1_at AI667826 30S ribosomal protein S31 - 2e-1 At4g21450 vesicle-associated membrane family protein / VAMP family protein C.G. S.X.
0.01 2e+0 34 ZmAffx.146.1.S1_at AI667826 - - 2e-1 At4g21450 vesicle-associated membrane family protein / VAMP family protein C.G. S.X.
0.01 2e+0 34 Zm.8132.1.A1_at BM347350 hypothetical protein LOC100280330 - 2e-7 At3g05545 transcription factor, putative / zinc finger (C3HC4 type RING finger) family protein C.G. S.X.
0.01 2e+0 34 Zm.6234.1.S1_at AI670674 hypothetical protein LOC100279472 - 4e-28 At2g30110 ATUBA1 C.G. S.X.
0.01 2e+0 34 Zm.5932.1.S1_at AB071695.1 response regulator 10 - 3e-1 At2g01760 ARR14 (ARABIDOPSIS RESPONSE REGULATOR 14) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.49 2e-85 317 Arabidopsis thaliana At5g18580 831976 FASS (FASS 1) fass mutants have aberrant cell shapes due to defects in arrangement of cortical microtubules. Encodes a protein highly conserved in higher plants and similar in its C-terminal part to B' regulatory subunits of type 2A protein phosphatases. Interacts with an Arabidopsis type A subunit of PP2A in the yeast two-hybrid system. - - - C.G. S.X.
0.46 4e-115 416 Glycine max Gma.13332.1.S1_at AW459753 - - 2e-97 At5g18580 FASS (FASS 1) C.G. S.X.
0.32 2e-148 525 Hordeum vulgare Contig8418_at Contig8418 - - 4e-20 At5g18580 FASS (FASS 1) C.G. S.X.
0.64 0 1713 Oryza sativa Os05g0149800 AK058366.1 - Calcium-binding EF-hand domain containing protein 4e-77 At5g18580 FASS (FASS 1) C.G. S.X.
0.44 3e-103 377 Populus trichocarpa PtpAffx.151179.1.S1_at AI161608 hypothetical protein - 2e-155 At5g18580 FASS (FASS 1) C.G. S.X.
0.65 0 1570 Triticum aestivum TaAffx.3182.1.S1_s_at CD879896 - - 7e-51 At5g18580 FASS (FASS 1) C.G. S.X.
0.40 1e-114 412 Vitis vinifera 1610573_at CF210407 hypothetical protein LOC100247694 - 1e-124 At5g18580 FASS (FASS 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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