Gene omics information

Query gene ID	Zm.8938.1.S1_at
Gene name	IDP636 protein
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	85.8	Zm.8938.1.S1_at	AY104264.1	IDP636 protein	-	1e-1	At1g75360	unknown protein	S.X.	H.G.	Please select
0.33	36.0	Zm.15678.3.A1_at	BM073330	hypothetical protein LOC100273150 /// hypothetical protein LOC100277471	-	3e+0	At5g16640	pentatricopeptide (PPR) repeat-containing protein	S.X.	H.G.	Please select
0.12	5.9	ZmAffx.1216.1.S1_at	1314400	-	-	2e+1	At5g64540	unknown protein	S.X.	H.G.	Please select
0.12	5.9	Zm.819.1.A1_at	BG266141	cp protein	-	3e-1	At4g09030	AGP10 (ARABINOGALACTAN PROTEIN 10)	S.X.	H.G.	Please select
0.09	4.0	Zm.2027.1.A1_at	CF056811	-	-	7e+0	At5g50740	metal ion binding	S.X.	H.G.	Please select
0.03	1.1	Zm.12737.2.S1_x_at	BG842257	40S ribosomal protein S12	-	2e-9	At1g15930	40S ribosomal protein S12 (RPS12A)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
28.4	99.7	GSM202314	Mo17 19 day after pollination embryo tissue, biological replicate 2	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
23.8	99.5	GSM202319	Mo17 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
23.2	99.5	GSM202309	Mo17 19 day after pollination embryo tissue, biological replicate 1	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
23.2	99.5	GSM202316	Mo17xB73 19 day after pollination embryo tissue, biological replicate 2	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
22.7	99.5	GSM202324	Mo17xB73 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
20.8	99.4	GSM202313	B73xMo17 19 day after pollination embryo tissue, biological replicate 1	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
19.9	99.3	GSM202322	B73x Mo17 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
19.8	99.3	GSM202311	Mo17xB73 19 day after pollination embryo tissue, biological replicate 1	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
19.2	99.3	GSM202320	B73 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
17.9	99.2	GSM202318	B73xMo17 19 day after pollination embryo tissue, biological replicate 2	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.20	4e-37	155	Zm.17219.2.S1_a_at	AY106749.1	adenine phosphoribosyltransferase	-	1e-5	At1g80050	APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2)	C.G.	S.X.	Please select
0.20	4e-37	155	Zm.17219.2.A1_at	AY106749.1	Adenine phosphoribosyltransferase	-	1e-5	At1g80050	APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2)	C.G.	S.X.	Please select
0.06	2e-5	50	Zm.14308.1.A1_at	AI979735	adenine phosphoribosyltransferase 1	-	7e-13	At1g27450	APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1)	C.G.	S.X.	Please select
0.02	2e-1	36	Zm.5918.1.A1_at	AF384035.1	nucleosome/chromatin assembly factor A	-	6e-4	At1g18800	NRP2 (NAP1-RELATED PROTEIN 2)	C.G.	S.X.	Please select
0.01	2e-1	36	Zm.1416.1.S1_at	CK787234	mitochondrial 2-oxoglutarate/malate carrier protein	-	1e-2	At5g09470	mitochondrial substrate carrier family protein	C.G.	S.X.	Please select
0.02	9e-1	34	Zm.8301.1.A1_at	BM379812	hypothetical protein LOC100278224	-	1e+0	At4g21780	unknown protein	C.G.	S.X.	Please select
0.01	9e-1	34	Zm.4033.1.A1_at	CF636055	hypothetical protein LOC100273217	-	5e-2	At5g43940	HOT5 (sensitive to hot temperatures 5)	C.G.	S.X.	Please select
0.02	9e-1	34	Zm.12053.1.A1_at	CF623242	hypothetical protein LOC100191648	-	2e-2	At3g57910	D111/G-patch domain-containing protein	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.9052.1.A1_at	BM351253	hypothetical protein LOC100274850	-	2e+0	At5g19080	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e-1	38	Arabidopsis thaliana	At1g75360	843872	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	5e-2	40	Glycine max	Gma.5292.1.S1_a_at	BM270049	-	-	5e-10	At5g11160	APT5 (Adenine phosphoribosyltransferase 5)	C.G.	S.X.	Please select
0.41	2e-85	315	Hordeum vulgare	Contig5656_at	Contig5656	-	-	2e-3	At1g80050	APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2)	C.G.	S.X.	Please select
0.40	4e-111	402	Oryza sativa	Os02g0613900	AK069606.1	-	Adenine phosphoribosyltransferase 2 (EC 2.4.2.7)(APRT)	4e-2	At1g80050	APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	3e+0	34	Populus trichocarpa	PtpAffx.155558.1.A1_a_at	CK091131	hypothetical protein	-	2e-12	At5g54440	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.41	1e-78	293	Triticum aestivum	Ta.13209.1.S1_at	CA702541	-	-	5e-4	At1g80050	APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2)	C.G.	S.X.	Please select
0.03	9e+0	30	Vitis vinifera	1615302_at	CF414670	-	-	7e-1	At3g44716	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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