Gene omics information

Query gene ID Zm.888.1.S1_at
Gene name hypothetical protein LOC100216750
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8696.3Zm.888.1.S1_atCK828040hypothetical protein LOC100216750-1e-7At1g08880H2AXAS.X.H.G.
0.5369.1Zm.7570.1.A1_atBM078988flavonol synthase-like protein-2e-2At3g502102-oxoacid-dependent oxidase, putativeS.X.H.G.
0.5065.7Zm.3286.1.A1_atBG265986--2e+0At4g32551LUG (LEUNIG)S.X.H.G.
0.4352.8Zm.16816.1.S1_a_atAY104056.1hypothetical protein LOC100216551-2e-25At3g54560HTA11S.X.H.G.
0.4048.5Zm.3044.1.S1_atAW360661--2e-10At1g27900RNA helicase, putativeS.X.H.G.
0.4048.5Zm.1423.1.A1_atCF047935RING zinc finger protein-like-2e-7At1g69330zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.3233.4Zm.11837.1.A1_atBM381140hypothetical protein LOC100275424-1e+0At4g16380metal ion bindingS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.296.9GSM202306Mo17xB73 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.996.7GSM202303Mo17 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.896.6GSM202297Mo17 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.896.6GSM202299Mo17xB73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.696.4GSM202302B73xMo17 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.696.4GSM202296B73xMo17 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.296.0GSM202307B73xMo17 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.195.9GSM202290Mo17 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.195.9GSM202295Mo17xB73 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
3.995.7GSM202304B73 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.319e-78289Zm.16911.1.A1_atBM332269--3e-11At4g27230HTA2 (histone H2A)C.G.S.X.
0.303e-74278Zm.6752.1.A1_atCK826604splicing factor, arginine/serine-rich 2-2e-6At4g27230HTA2 (histone H2A)C.G.S.X.
0.321e-61236Zm.14706.1.S1_atAY103710.1--2e-3At4g27230HTA2 (histone H2A)C.G.S.X.
0.307e-60230Zm.15894.1.A1_atBG873874--3e-14At4g27230HTA2 (histone H2A)C.G.S.X.
0.263e-59228Zm.13443.1.A1_atU08225.1Histone H2A-4e-11At5g02560HTA12C.G.S.X.
0.304e-55214Zm.16259.1.A1_x_atBQ539455hypothetical protein LOC100273269-1e-6At4g27230HTA2 (histone H2A)C.G.S.X.
0.327e-54210Zm.16259.2.A1_x_atCD951359hypothetical protein LOC100273269-4e-7At4g27230HTA2 (histone H2A)C.G.S.X.
0.337e-51200Zm.13002.1.S1_atCF041204--1e-10At4g27230HTA2 (histone H2A)C.G.S.X.
0.155e-24111Zm.13532.1.S1_atBQ618971hypothetical protein LOC100193816-1e-10At4g27230HTA2 (histone H2A)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.121e-757Arabidopsis thalianaAt1g08880837409H2AXAEncodes HTA5, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (γ-H2AX) occurs around the break site. H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse γ-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no γ-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of γ-H2AX to a maximum of >50 diffuse foci. The level of γH2AX then remains constant for a further 13 h before undergoing a gradual decrease to 1020 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin.---C.G.S.X.
0.232e-1377Glycine maxPsAffx.C4000035_atPsAffx.C4000035--4e+0At5g59870HTA6C.G.S.X.
0.352e-72272Hordeum vulgareContig412_x_atContig412--1e-3At4g27230HTA2 (histone H2A)C.G.S.X.
0.341e-86321Oryza sativaOs03g0279200CA753594-Histone H2A1e-7At5g02560HTA12C.G.S.X.
0.092e-448Populus trichocarpaPtpAffx.11933.1.S1_atCX659426histone 2-2e-12At1g08880H2AXAC.G.S.X.
0.351e-72274Triticum aestivumTa.28802.3.S1_atBJ228498--1e-3At4g27230HTA2 (histone H2A)C.G.S.X.
0.187e-1373Vitis vinifera1608927_atCF512418hypothetical protein LOC100241700-2e+0At1g51060HTA10C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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