Gene omics information

Query gene ID	Zm.878.2.S1_at
Gene name	60S ribosomal protein L35
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.43	52.8	Zm.878.2.S1_at	CF016267	60S ribosomal protein L35	-	4e-19	At5g02610	60S ribosomal protein L35 (RPL35D)	S.X.	H.G.	Please select
0.55	71.6	Zm.1134.1.A1_at	AY112160.1	hypothetical protein LOC100193278	-	3e+0	At2g26940	zinc finger (C2H2 type) family protein	S.X.	H.G.	Please select
0.53	69.1	Zm.6555.2.S1_at	CD446565	hypothetical protein LOC100273907	-	1e-31	At3g11710	ATKRS-1 (ARABIDOPSIS THALIANA LYSYL-TRNA SYNTHETASE 1)	S.X.	H.G.	Please select
0.44	55.7	Zm.18135.1.A1_at	CN845300	-	-	4e+0	Atmg01410	-	S.X.	H.G.	Please select
0.33	36.0	Zm.16824.1.S1_at	CF602732	SAM domain family protein	-	5e-1	At3g07170	sterile alpha motif (SAM) domain-containing protein	S.X.	H.G.	Please select
0.23	18.6	Zm.19022.1.S1_at	CO526898	hypothetical protein LOC100273481	-	7e-1	At5g06570	hydrolase	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.6	95.2	GSM205375	Mo17xB73 13 DAP endosperm tissue biological replicate 3	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.4	94.9	GSM205369	Mo17 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.3	94.7	GSM205368	B73xMo17 13 DAP endosperm tissue biological replicate 1	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.2	94.5	GSM205372	B73xMo17 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.2	94.5	GSM205374	B73 13 DAP endosperm tissue biological replicate 3	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.2	94.5	GSM205367	Mo17xB73 13 DAP endosperm tissue biological replicate 1	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.1	94.3	GSM205370	B73 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.1	94.3	GSM205371	Mo17xB73 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.1	94.3	GSM205429	B73xMo17 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
3.0	94.0	GSM205373	Mo17 13 DAP endosperm tissue biological replicate 3	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.54	1e-180	630	Zm.6206.1.A1_at	AY109453.1	60S ribosomal protein L35	-	5e-16	At3g09500	60S ribosomal protein L35 (RPL35A)	C.G.	S.X.	Please select
0.51	1e-180	630	Zm.6206.1.S1_at	AY109453.1	-	-	5e-16	At3g09500	60S ribosomal protein L35 (RPL35A)	C.G.	S.X.	Please select
0.47	2e-136	484	Zm.878.1.S1_x_at	AI855310	60S ribosomal protein L35	-	6e-3	At2g39390	60S ribosomal protein L35 (RPL35B)	C.G.	S.X.	Please select
0.47	2e-136	484	Zm.878.1.S1_at	AI855310	60S ribosomal protein L35	-	6e-3	At2g39390	60S ribosomal protein L35 (RPL35B)	C.G.	S.X.	Please select
0.02	4e-2	38	Zm.9030.1.A1_at	BM381725	39S ribosomal protein L47	-	7e+0	At5g06500	AGL96 (AGAMOUS-LIKE 96)	C.G.	S.X.	Please select
0.03	4e-2	38	Zm.12248.3.A1_at	AI770379	Hypothetical protein LOC100216999	-	3e+0	At5g65660	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.03	4e-2	38	Zm.12248.3.S1_at	AI770379	hypothetical protein LOC100216999	-	3e+0	At5g65660	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.02	2e-1	36	Zm.9638.1.S1_at	BM332555	-	-	4e-1	At5g57655	xylose isomerase family protein	C.G.	S.X.	Please select
0.01	2e-1	36	Zm.268.1.A1_at	U17979.1	eukaryotic initiation factor 4A	-	1e-110	At3g13920	EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.38	4e-19	95	Arabidopsis thaliana	At5g02610	831853	60S ribosomal protein L35 (RPL35D)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic ribosome, cytosolic large ribosomal subunit, ribosome, plasma membrane;MOBAFP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.25	4e-17	89	Glycine max	Gma.12313.1.S1_at	BE807239	-	-	2e-37	At3g09500	60S ribosomal protein L35 (RPL35A)	C.G.	S.X.	Please select
0.53	5e-85	313	Hordeum vulgare	Contig392_s_at	Contig392	-	-	6e-14	At2g39390	60S ribosomal protein L35 (RPL35B)	C.G.	S.X.	Please select
0.52	8e-121	434	Oryza sativa	Os02g0503400	AK119704.1	-	-	3e-10	At3g09500	60S ribosomal protein L35 (RPL35A)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.20	2e-12	73	Populus trichocarpa	Ptp.7031.1.S1_at	CF228095	hypothetical protein	-	3e-72	At2g39390	60S ribosomal protein L35 (RPL35B)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.77	0	765	Triticum aestivum	TaAffx.112545.1.S1_at	CA623101	-	-	2e-2	At3g09500	60S ribosomal protein L35 (RPL35A)	C.G.	S.X.	Please select
0.19	2e-18	91	Vitis vinifera	1612626_at	CF211601	hypothetical protein LOC100265729	-	1e-47	At2g39390	60S ribosomal protein L35 (RPL35B)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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