CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.8680.1.A1_at

Gene name hypothetical protein LOC100277231

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.8680.1.A1_at BM075162 hypothetical protein LOC100277231 - 1e-3 At1g70760 CRR23 ((chlororespiratory reduction 23) S.X. H.G.
0.27 24.6 Zm.10177.1.A1_at BM382782 - - 9e-2 At2g41200 unknown protein S.X. H.G.
0.21 15.5 Zm.2593.1.S1_at CA403212 ras-related protein ARA-3 - 5e-54 At5g59840 Ras-related GTP-binding family protein S.X. H.G.
0.11 5.3 Zm.9842.1.A1_at BM340816 - - 3e-1 At5g20370 serine-rich protein-related S.X. H.G.
0.10 4.6 Zm.1281.1.S1_at CD996711 - - 7e-8 At1g51940 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein S.X. H.G.
0.04 1.5 Zm.12224.1.S1_at CK370517 hypothetical protein LOC100278972 - 8e+0 At4g24380 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.8 98.5 GSM320444 protocol: mRNA - genotype: CML69 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.7 98.5 GSM253270 ZM_4.5d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
9.0 98.2 GSM320438 protocol: mRNA - genotype: B73 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5 98.1 GSM253268 ZM_4.5d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
8.1 98.0 GSM320439 protocol: mRNA - genotype: B73 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.0 98.0 GSM253269 ZM_4.5d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
7.3 97.8 GSM320440 protocol: mRNA - genotype: B73 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.9 97.7 GSM253264 ZM_4d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
6.5 97.5 GSM253262 ZM_4d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
6.5 97.5 GSM320445 protocol: mRNA - genotype: CML69 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-2 38 Zm.9048.1.A1_x_at CF024226 hypothetical protein LOC100193744 - 2e+1 At5g35740 glycosyl hydrolase family protein 17 C.G. S.X.
0.03 3e-2 38 Zm.9048.1.A1_at CF024226 hypothetical protein LOC100193744 - 2e+1 At5g35740 glycosyl hydrolase family protein 17 C.G. S.X.
0.01 1e-1 36 Zm.15605.1.S1_at CA402349 isopenicillin N epimerase - 2e-2 At3g62130 epimerase-related C.G. S.X.
0.02 4e-1 34 Zm.17146.1.A1_at AY183450.1 legumin-like protein - 2e-1 At1g07750 cupin family protein C.G. S.X.
0.03 2e+0 32 Zm.18048.1.A1_at CF624002 - - 5e+0 At2g32580 unknown protein C.G. S.X.
0.01 6e+0 30 ZmAffx.1446.1.S1_at 40794996-4 - - 4e+0 At5g44560 VPS2.2 C.G. S.X.
0.02 6e+0 30 Zm.8882.1.S1_at BG320046 - - 1e+1 At1g36732 CPuORF19 (Conserved peptide upstream open reading frame 19) C.G. S.X.
0.02 6e+0 30 Zm.7848.1.A1_at CF635310 - - 1e-1 At4g18370 DEG5 (DEGP PROTEASE 5) C.G. S.X.
0.02 6e+0 30 Zm.4845.2.S1_at AI833522 - - 3e+0 At1g08560 SYP111 (SYNTAXIN OF PLANTS 111) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 1e-3 44 Arabidopsis thaliana At1g70760 843413 CRR23 ((chlororespiratory reduction 23) a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located on the thylakoid membrane. Mutant has impaired NAD(P)H dehydrogenase activity. - - - C.G. S.X.
0.02 3e-1 36 Glycine max PsAffx.C369000002_at PsAffx.C369000002 - - 9e+0 At3g57690 AGP23 (ARABINOGALACTAN-PROTEIN 23) C.G. S.X.
0.16 9e-21 99 Hordeum vulgare Contig5950_s_at Contig5950 - - 4e-4 At1g70760 CRR23 ((chlororespiratory reduction 23) C.G. S.X.
0.14 3e-33 143 Oryza sativa Os05g0348100 CB645980 - Hypothetical protein 5e-8 At1g70760 CRR23 ((chlororespiratory reduction 23) C.G. S.X.
0.03 5e+0 32 Populus trichocarpa PtpAffx.223102.1.S1_at pmrna40924 - - 2e+1 At2g35658 unknown protein C.G. S.X.
0.13 2e-14 79 Triticum aestivum Ta.8219.1.S1_at CD877084 - - 2e+0 At5g13850 NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3) C.G. S.X.
0.10 2e-5 48 Vitis vinifera 1619067_at CB339465 hypothetical protein LOC100259429 - 8e-27 At1g70760 CRR23 ((chlororespiratory reduction 23) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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