Gene omics information

Query gene ID	Zm.8614.1.A1_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.94	99.5	Zm.8614.1.A1_at	BM341063	-	-	1e-1	At4g01640	-	S.X.	H.G.	Please select
0.68	86.1	Zm.10503.1.S1_at	AY108225.1	hypothetical protein LOC100278403	-	8e-1	At4g20010	PTAC9 (PLASTID TRANSCRIPTIONALLY ACTIVE 9)	S.X.	H.G.	Please select
0.55	71.6	ZmAffx.180.1.S1_at	AI668329	-	-	8e-1	At1g17235	RTFL11 (ROTUNDIFOLIA LIKE 11)	S.X.	H.G.	Please select
0.54	69.8	Zm.18313.1.A1_at	CO532950	hypothetical protein LOC100193523	-	8e-11	At5g42990	UBC18 (ubiquitin-conjugating enzyme 18)	S.X.	H.G.	Please select
0.53	69.1	Zm.4795.2.S1_at	AI740164	-	-	2e-1	At4g28703	-	S.X.	H.G.	Please select
0.52	67.3	ZmAffx.822.1.S1_at	AI770502	-	-	2e-1	At5g47600	heat shock protein-related	S.X.	H.G.	Please select
0.51	66.4	ZmAffx.1361.1.S1_at	40794996-49	-	-	7e-1	At3g10940	protein phosphatase-related	S.X.	H.G.	Please select
0.47	59.9	ZmAffx.1134.1.A1_at	AW331087	-	-	8e-1	At4g10270	wound-responsive family protein	S.X.	H.G.	Please select
0.46	58.4	ZmAffx.863.1.S1_at	AI770721	uracil phosphoribosyltransferase	-	1e+1	Atcg01300	-	S.X.	H.G.	Please select
0.44	55.7	ZmAffx.1409.1.S1_at	40794996-84	-	-	2e+0	At4g15790	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
78.2	100.0	GSM253256	ZM_2d_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
42.5	99.9	GSM253257	ZM_2d_Mock_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
41.8	99.9	GSM253258	ZM_2d_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
15.0	98.9	GSM253270	ZM_4.5d_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
12.6	98.7	GSM253268	ZM_4.5d_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
10.1	98.4	GSM253259	ZM_2d_SG200_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
6.8	97.6	GSM253263	ZM_4d_Mock_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
5.5	97.1	GSM253250	ZM_24h_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
4.8	96.6	GSM253261	ZM_2d_SG200_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
4.3	96.1	GSM253260	ZM_2d_SG200_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.32	7e-41	167	Zm.2549.1.A1_at	BM336803	-	-	2e+1	At3g49230	unknown protein	C.G.	S.X.	Please select
0.01	1e-2	40	Zm.3085.1.S1_at	AF440227.1	histone acetyl transferase GNAT/MYST 101	-	5e-27	At3g54610	GCN5	C.G.	S.X.	Please select
0.02	1e-2	40	Zm.12220.1.A1_at	BM380993	DNA binding protein	-	2e+0	At5g55570	unknown protein	C.G.	S.X.	Please select
0.04	4e-2	38	ZmAffx.821.1.A1_at	AI770497	-	-	3e+0	At3g21840	ASK7 (ARABIDOPSIS SKP1-LIKE 7)	C.G.	S.X.	Please select
0.04	4e-2	38	ZmAffx.821.1.S1_at	AI770497	heat shock 70 kDa protein 4	-	3e+0	At3g21840	ASK7 (ARABIDOPSIS SKP1-LIKE 7)	C.G.	S.X.	Please select
0.02	4e-2	38	Zm.4447.1.A1_at	AW018210	hypothetical protein LOC100191204	-	2e-1	At3g27330	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.02	4e-2	38	Zm.17340.1.S1_at	CK370398	-	-	4e-1	At4g31040	proton extrusion protein-related	C.G.	S.X.	Please select
0.02	4e-2	38	Zm.17522.1.S1_at	CK144399	-	-	8e-1	At2g02180	TOM3	C.G.	S.X.	Please select
0.04	4e-2	38	Zm.16474.1.A1_at	CF646564	hypothetical protein LOC100193251	-	7e-2	At4g12080	DNA-binding family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e-1	38	Arabidopsis thaliana	At4g01640	828177	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	9e-3	42	Glycine max	PsAffx.C132000006_at	PsAffx.C132000006	-	-	4e+0	At5g13470	unknown protein	C.G.	S.X.	Please select
0.04	1e-2	40	Hordeum vulgare	AF108009_at	AF108009	-	-	3e-1	At1g01453	-	C.G.	S.X.	Please select
0.05	4e-15	83	Oryza sativa	Os.12629.1.S2_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	4e-2	40	Populus trichocarpa	PtpAffx.43837.1.A1_s_at	CV256587	hypothetical protein	-	3e-6	At4g24026	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.07	2e-9	63	Triticum aestivum	Ta.17978.1.S1_at	CA626799	-	-	2e-1	At3g51880	HMGB1 (HIGH MOBILITY GROUP B 1)	C.G.	S.X.	Please select
0.03	3e-2	38	Vitis vinifera	1613303_at	CB977627	similar to plectin-related	-	3e-16	At2g26770	plectin-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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