CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.859.1.A1_at

Gene name hypothetical protein LOC100191283

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 95.6 Zm.859.1.A1_at CF060267 hypothetical protein LOC100191283 - 8e-1 At4g28420 aminotransferase, putative S.X. H.G.
0.67 85.8 Zm.5229.1.A1_at CO519750 ATP-dependent transporter ycf16 - 4e-24 At3g10670 ATNAP7 S.X. H.G.
0.60 77.8 Zm.17189.1.A1_at BM268883 - - 5e+0 At5g60540 PDX2 (PYRIDOXINE BIOSYNTHESIS 2) S.X. H.G.
0.53 69.1 Zm.15306.1.A1_at CK369690 phytol kinase - 9e+0 Atmg00160 - S.X. H.G.
0.40 48.5 Zm.7750.4.S1_at AW499152 - - 3e-28 At1g75780 TUB1 S.X. H.G.
0.40 48.5 Zm.2548.1.A1_at AY106256.1 - - 2e-26 At4g02570 ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.2 98.8 GSM206311 Left pulvinus control total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
12.0 98.6 GSM206329 Right pulvinus control polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
11.6 98.6 GSM206317 Right pulvinus control total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
11.3 98.5 GSM206323 Left pulvinus control polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
11.0 98.5 GSM206322 Lower pulvinus 60 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
10.0 98.4 GSM206319 Lower pulvinus 5 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
9.6 98.3 GSM206321 Lower pulvinus 30 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
9.2 98.2 GSM206324 Upper pulvinus 2 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
9.2 98.2 GSM206320 Lower pulvinus 15 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
9.1 98.2 GSM206313 Upper pulvinus 5 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 6e-3 42 Zm.17532.1.A1_at CK369868 hypothetical protein LOC100279205 - 2e-1 At5g53970 aminotransferase, putative C.G. S.X.
0.02 9e-2 38 Zm.4573.1.A1_at BM340312 hypothetical protein LOC100273245 - 4e-1 At1g02350 protoporphyrinogen oxidase-related C.G. S.X.
0.01 9e-2 38 Zm.3246.1.S1_a_at AA979858 multicystatin - 4e-1 At4g04360 unknown protein C.G. S.X.
0.01 4e-1 36 Zm.645.1.S1_at AF118114.1 MFP1 attachment factor 1 - 4e-1 At1g16510 auxin-responsive family protein C.G. S.X.
0.02 4e-1 36 Zm.3523.1.S1_at AY105303.1 hypothetical protein LOC100276213 - 4e-1 At1g23060 unknown protein C.G. S.X.
0.01 4e-1 36 Zm.3376.1.A1_at AY104431.1 hypothetical protein LOC100273263 - 5e-2 At2g21730 CAD2 (CINNAMYL ALCOHOL DEHYDROGENASE HOMOLOG 2) C.G. S.X.
0.01 4e-1 36 Zm.2197.1.S1_a_at AF007785.1 cystathionine gamma-synthase1 - 6e-5 At3g01120 MTO1 (METHIONINE OVERACCUMULATION 1) C.G. S.X.
0.01 4e-1 36 Zm.14970.1.A1_at AY106368.1 Hypothetical protein LOC100193922 - 1e-4 At3g60660 unknown protein C.G. S.X.
0.02 4e-1 36 Zm.14970.1.S1_at BM378195 Spindle and kinetochore-associated protein 1 homolog - 1e-4 At3g60660 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 8e-1 36 Arabidopsis thaliana At4g28420 828959 aminotransferase, putative F:1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity;P:cellular amino acid and derivative metabolic process, biosynthetic process;C:cellular_component unknown;BOPAMF - - - C.G. S.X.
0.02 5e-3 44 Glycine max Gma.10835.1.S1_at CD406757 tyrosine aminotransferase - 7e-17 At5g53970 aminotransferase, putative C.G. S.X.
0.46 2e-55 216 Hordeum vulgare Contig7288_at Contig7288 - - 5e-5 At2g24850 TAT3 (TYROSINE AMINOTRANSFERASE 3) C.G. S.X.
0.51 1e-78 295 Oryza sativa Os.7989.1.S1_at - - - 0 C.G. S.X.
0.07 3e-4 48 Populus trichocarpa PtpAffx.9887.2.S1_at CV244429 - - 2e-3 At5g53970 aminotransferase, putative C.G. S.X.
0.53 2e-48 194 Triticum aestivum Ta.21094.1.S1_at CD873115 - - 7e-1 At2g24850 TAT3 (TYROSINE AMINOTRANSFERASE 3) C.G. S.X.
0.05 4e-3 42 Vitis vinifera 1618777_at CA809083 hypothetical protein LOC100241782 - 5e-25 At5g53970 aminotransferase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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