Gene omics information

Query gene ID	Zm.8578.3.S1_at
Gene name	hypothetical protein LOC100279095
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	85.8	Zm.8578.3.S1_at	BI431120	hypothetical protein LOC100279095	-	6e-3	At1g23710	unknown protein	S.X.	H.G.	Please select
0.67	85.8	Zm.10170.3.A1_a_at	CF637378	hypothetical protein LOC100194222	-	3e-1	At5g38344	transmembrane receptor	S.X.	H.G.	Please select
0.61	79.5	Zm.10171.1.A1_at	BM382616	hypothetical protein LOC100279748	-	4e-17	At4g37870	PCK1 (PHOSPHOENOLPYRUVATE CARBOXYKINASE 1)	S.X.	H.G.	Please select
0.44	55.7	Zm.10170.3.A1_at	CF637378	-	-	3e-1	At5g38344	transmembrane receptor	S.X.	H.G.	Please select
0.19	12.8	Zm.6655.1.A1_at	CF624351	hypothetical protein LOC100193491	-	4e-21	At5g09660	PMDH2 (peroxisomal NAD-malate dehydrogenase 2)	S.X.	H.G.	Please select
0.11	5.3	Zm.4324.1.A1_at	CO524609	hypothetical protein LOC100191178	-	2e-1	At4g16220	hydrolase, acting on ester bonds	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
34.2	99.9	GSM253274	ZM_8d_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
21.3	99.4	GSM253264	ZM_4d_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
21.2	99.4	GSM253276	ZM_8d_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
20.9	99.4	GSM253262	ZM_4d_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
16.5	99.0	GSM253275	ZM_8d_Mock_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
12.0	98.6	GSM253263	ZM_4d_Mock_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
7.5	97.8	GSM323171	Zm_SG200Dpep1_24hpi_II	GSE12892	Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
7.1	97.7	GSM253252	ZM_24h_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
7.1	97.7	GSM253258	ZM_2d_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
7.0	97.7	GSM253255	ZM_24h_SG200_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.88	0	1178	Zm.8578.3.S1_s_at	BI431120	hypothetical protein LOC100275312	-	6e-3	At1g23710	unknown protein	C.G.	S.X.	Please select
0.68	8e-136	482	Zm.1323.1.S1_x_at	AY107806.1	hypothetical protein LOC100275312	-	6e+0	At3g30840	unknown protein	C.G.	S.X.	Please select
0.68	8e-136	482	Zm.1323.1.S1_at	AY107806.1	hypothetical protein LOC100275312	-	6e+0	At3g30840	unknown protein	C.G.	S.X.	Please select
0.50	5e-128	456	Zm.8578.1.A1_at	BM335222	hypothetical protein LOC100275664	-	3e-1	At1g23710	unknown protein	C.G.	S.X.	Please select
0.20	3e-58	224	Zm.1554.2.A1_x_at	BQ047837	-	-	2e-21	At3g07760	-	C.G.	S.X.	Please select
0.34	2e-56	218	Zm.15871.2.A1_at	AI668188	hypothetical protein LOC100216742	-	8e-1	At2g04515	unknown protein	C.G.	S.X.	Please select
0.27	2e-56	218	Zm.15871.2.S1_at	AI668188	Hypothetical protein LOC100216742	-	8e-1	At2g04515	unknown protein	C.G.	S.X.	Please select
0.26	5e-54	210	Zm.8578.2.A1_at	BM347528	hypothetical protein LOC100278807	-	8e+0	At3g06120	MUTE (MUTE)	C.G.	S.X.	Please select
0.29	5e-54	210	Zm.15860.1.A1_at	BM073859	-	-	5e+0	At2g17180	zinc finger (C2H2 type) family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	6e-3	42	Arabidopsis thaliana	At1g23710	838981	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	Gma.13651.1.A1_at	CD402326	-	-	4e-2	At3g44760	unknown protein	C.G.	S.X.	Please select
0.03	7e-1	34	Hordeum vulgare	rbags1d24_at	rbags1d24	-	-	7e-20	At5g56030	HSP81-2 (HEAT SHOCK PROTEIN 81-2)	C.G.	S.X.	Please select
0.03	1e+1	32	Oryza sativa	OsAffx.29131.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	1e-1	38	Populus trichocarpa	Ptp.221.2.A1_s_at	CK087550	hypothetical protein	-	4e-4	At3g02200	proteasome family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.35	1e-102	373	Triticum aestivum	TaAffx.86070.1.S1_at	CA616968	-	-	4e+0	At3g45770	oxidoreductase, zinc-binding dehydrogenase family protein	C.G.	S.X.	Please select
0.03	4e-1	34	Vitis vinifera	1618665_at	CD799476	-	-	7e-1	At5g56070	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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