Gene omics information

Query gene ID Zm.8576.1.A1_at
Gene name caffeic acid 3-O-methyltransferase
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7792.1Zm.8576.1.A1_atBM074724caffeic acid 3-O-methyltransferase-4e-2At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)S.X.H.G.
0.6785.8Zm.10123.1.S1_atBM380717heat- and acid-stable phosphoprotein-3e-14At5g46020unknown proteinS.X.H.G.
0.6179.5Zm.522.1.S1_atAF200531.1cellulose synthase7-1e-38At2g21770CESA9 (CELLULOSE SYNTHASE A9)S.X.H.G.
0.3844.2Zm.9194.1.A1_atBM267243--1e+0At3g03456unknown proteinS.X.H.G.
0.3336.0Zm.4401.1.A1_atAY108702.1YGL010w-like protein-9e+0At5g59360unknown proteinS.X.H.G.
0.3029.8Zm.2602.1.S1_atAY109922.1hypothetical protein LOC100217277-1e-2At5g243403'-5' exonuclease domain-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.598.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.497.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.597.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.296.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.196.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.096.7GSM320439protocol: mRNA - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.996.7GSM320438protocol: mRNA - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.996.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.896.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.396.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.013e-446Zm.508.1.S1_atCA401738hypothetical protein LOC100191390-3e-26At5g20940glycosyl hydrolase family 3 proteinC.G.S.X.
0.027e-238Zm.6995.2.A1_a_atBG873820prefoldin subunit 3 /// prefoldin subunit 3-7e-3At5g49510PDF3 (PREFOLDIN 3)C.G.S.X.
0.027e-238Zm.6995.2.A1_atBG873820prefoldin subunit 3-7e-3At5g49510PDF3 (PREFOLDIN 3)C.G.S.X.
0.023e-136Zm.6840.1.S1_atCD44793840S ribosomal protein S26-1e-10At2g4059040S ribosomal protein S26 (RPS26B)C.G.S.X.
0.023e-136Zm.4894.1.A1_atBM076024--1e+0At5g05340peroxidase, putativeC.G.S.X.
0.013e-136Zm.3406.1.S1_atAY566301.14-coumarate coenzyme A ligase-7e-2At1g516804CL1 (4-COUMARATE:COA LIGASE 1)C.G.S.X.
0.013e-136Zm.19036.1.S1_atCA402843hypothetical protein LOC100272946-3e-4At2g32770purple acid phosphatase (PAP13)C.G.S.X.
0.013e-136Zm.10825.1.A1_atCF629429O-methyltransferase BX7-8e-1At3g13594unknown proteinC.G.S.X.
0.013e-136Zm.10825.1.A2_atBQ619394O-methyltransferase BX7 /// IDP478 protein-8e-1At3g13594unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e-240Arabidopsis thalianaAt5g54160835504ATOMT1 (O-METHYLTRANSFERASE 1)A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase---C.G.S.X.
0.023e-757Glycine maxGmaAffx.32612.1.S1_atBU762383--3e+0At5g47229unknown proteinC.G.S.X.
0.505e-148523Hordeum vulgareContig14539_atContig14539--1e-1At3g53140O-diphenol-O-methyl transferase, putativeC.G.S.X.
0.628e-138492Oryza sativaOs02g0823400AK105029.2-S-adenosyl-L-methionine: beta-alanineN-methyltransferase (Fragment)1e-2At3g53140O-diphenol-O-methyl transferase, putativeC.G.S.X.
0.052e-242Populus trichocarpaPtp.3984.1.A1_atCV242251beta-alanine n-methyltransferase related-5e-20At3g53140O-diphenol-O-methyl transferase, putativeC.G.S.X.
0.634e-138492Triticum aestivumTa.1846.1.S1_x_atBE446675--2e-1At3g53140O-diphenol-O-methyl transferase, putativeC.G.S.X.
0.028e-134Vitis vinifera1619682_x_atCF205002.1--3e-45At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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