CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.8456.1.A1_at

Gene name hypothetical protein LOC100273451

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 77.8 Zm.8456.1.A1_at BM335025 hypothetical protein LOC100273451 - 5e+0 At5g14020 - S.X. H.G.
0.47 59.9 Zm.12034.1.A1_at BM382798 hypothetical protein LOC100273559 - 4e+0 At1g08570 ACHT4 (ATYPICAL CYS HIS RICH THIOREDOXIN 4) S.X. H.G.
0.38 44.2 Zm.1063.1.A1_at BM332190 - - 1e-9 At1g25350 OVA9 (ovule abortion 9) S.X. H.G.
0.33 36.0 Zm.16229.1.A1_at CF017148 microtubule-associated protein MAP65-1a - 5e+0 At3g56110 PRA1.B1 (PRENYLATED RAB ACCEPTOR 1.B1) S.X. H.G.
0.27 24.6 Zm.12577.1.A1_at AF527610.1 DNA methyl transferase 106 - 3e-1 At3g25680 - S.X. H.G.
0.10 4.6 Zm.14438.1.A1_at CO520860 VAMP-like protein YKT62 - 4e-12 At5g58180 ATYKT62 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.7 98.5 GSM253270 ZM_4.5d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
9.5 98.3 GSM253269 ZM_4.5d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
8.9 98.2 GSM320438 protocol: mRNA - genotype: B73 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.6 98.1 GSM320445 protocol: mRNA - genotype: CML69 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5 98.1 GSM320439 protocol: mRNA - genotype: B73 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.8 97.9 GSM253268 ZM_4.5d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
7.5 97.8 GSM320444 protocol: mRNA - genotype: CML69 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.0 97.7 GSM320446 protocol: mRNA - genotype: CML69 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.8 96.6 GSM320440 protocol: mRNA - genotype: B73 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.8 95.5 GSM320442 protocol: mRNA - genotype: Mo17 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e-1 36 Zm.14828.1.S1_at AJ430632.1 m15 protein - 8e-10 At5g60910 AGL8 (agamous-like 8) C.G. S.X.
0.02 2e+0 32 Zm.6216.1.S1_at CO531189 hypothetical protein LOC100193337 - 2e-3 At1g79590 SYP52 (SYNTAXIN OF PLANTS 52) C.G. S.X.
0.02 2e+0 32 Zm.4784.1.A1_at BM338307 hypothetical protein LOC100277212 - 1e-1 At1g74340 dolichol phosphate-mannose biosynthesis regulatory protein-related C.G. S.X.
0.02 2e+0 32 Zm.11727.1.A1_at BM380238 - - 5e+0 At5g10320 unknown protein C.G. S.X.
0.02 9e+0 30 Zm.7509.1.A1_at BM078742 - - 1e+0 At1g29960 peptidase/ serine-type peptidase C.G. S.X.
0.02 9e+0 30 Zm.6463.1.A1_at AW066999 hypothetical protein LOC100272541 - 2e-5 At2g28590 protein kinase family protein C.G. S.X.
0.03 9e+0 30 Zm.4624.1.A1_at AI737393 hypothetical protein LOC100278484 - 2e-1 At5g24879 unknown protein C.G. S.X.
0.02 9e+0 30 Zm.3975.1.S1_at AY104816.1 5a2 protein - 2e+1 At5g20520 WAV2 (WAVY GROWTH 2) C.G. S.X.
0.02 9e+0 30 Zm.3673.1.A1_at AW037200 - - 6e-21 At1g14000 VIK (VH1-INTERACTING KINASE) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e+0 32 Arabidopsis thaliana At5g14020 831250 - F:unknown;P:N-terminal protein myristoylation;C:vacuole;P - - - C.G. S.X.
0.03 2e+0 34 Glycine max PsAffx.psZO001iB01r_s_at PsAffx.psZO001iB01r - - 3e+0 At5g62750 unknown protein C.G. S.X.
0.29 3e-15 81 Hordeum vulgare Contig20263_at Contig20263 - - 9e-2 At4g27600 pfkB-type carbohydrate kinase family protein C.G. S.X.
0.05 2e-1 38 Oryza sativa Os10g0573000 AK072743.1 - Carbohydrate kinase-like protein 7e-17 At4g27600 pfkB-type carbohydrate kinase family protein C.G. S.X.
0.07 8e+0 32 Populus trichocarpa Ptp.930.1.A1_at CV257518 hypothetical protein - 6e-19 At4g27600 pfkB-type carbohydrate kinase family protein C.G. S.X.
0.54 4e-118 424 Triticum aestivum Ta.26550.1.A1_at CD491187 - - 1e+0 At3g20400 EMB2743 (EMBRYO DEFECTIVE 2743) C.G. S.X.
0.04 2e+1 28 Vitis vinifera 1620043_at AY427149.1 hypothetical protein LOC100248492 - 1e-3 At2g31880 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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