CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.842.1.A1_at

Gene name hypothetical protein LOC100273345

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 95.6 Zm.842.1.A1_at BM337077 hypothetical protein LOC100273345 - 8e-3 At5g38910 germin-like protein, putative S.X. H.G.
0.38 44.2 Zm.19206.1.S1_at AY109372.1 - - 5e-8 At2g16860 GCIP-interacting family protein S.X. H.G.
0.21 15.5 Zm.2076.2.A1_at CF634644 hypothetical protein LOC100194265 - 2e-3 At3g04230 40S ribosomal protein S16 (RPS16B) S.X. H.G.
0.15 8.6 Zm.4742.1.A1_at CO520887 - - 1e-2 At2g04890 SCL21 (SCARECROW-LIKE 21) S.X. H.G.
0.14 7.7 Zm.9535.1.A1_x_at BM075999 - - 5e+0 At5g56470 FAD-dependent oxidoreductase family protein S.X. H.G.
0.05 1.9 Zm.7644.2.S1_at BM341428 - - 4e+0 At5g23760 heavy-metal-associated domain-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
50.3 100.0 GSM162266 Wild type 2 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
36.4 99.9 GSM162264 Mutant 2 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
33.3 99.9 GSM162267 Mutant 1 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
32.9 99.8 GSM162265 Wild type 1 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
19.3 99.3 GSM375796 Deep-sowing 10d treatment GA3, biological rep2 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
18.4 99.2 GSM375791 Deep-sowing 10d treatment GA3, biological rep1 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
11.0 98.5 GSM385708 Deep-sowing 10d treatment IAA, biological rep2 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
10.6 98.4 GSM385707 Deep-sowing 10d treatment IAA, biological rep1 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
10.5 98.4 GSM375788 Deep-sowing 10d treatment Control, biological rep1 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
6.9 97.7 GSM375794 Deep-sowing 10d treatment UCZ, biological rep1 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.22 1e-18 93 Zm.2525.1.A1_at BM380204 germin-like protein subfamily 1 member 11 - 3e-2 At1g02335 GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.) C.G. S.X.
0.15 2e-17 89 Zm.6671.3.S1_at CO519752 hypothetical protein LOC100273935 - 2e-3 At1g02335 GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.) C.G. S.X.
0.24 3e-10 65 Zm.11238.1.A1_at BM340814 - - 5e-3 At5g39100 GLP6 (GERMIN-LIKE PROTEIN 6) C.G. S.X.
0.14 2e-7 56 Zm.8357.1.A1_at BM267266 - - 1e-4 At3g62020 GLP10 (GERMIN-LIKE PROTEIN 10) C.G. S.X.
0.04 6e-5 48 Zm.1315.1.A1_at BM348474 - - 2e-3 At4g14630 GLP9 (GERMIN-LIKE PROTEIN 9) C.G. S.X.
0.02 1e-2 40 Zm.10085.1.A1_at BM382598 - - 6e+0 At4g02270 pollen Ole e 1 allergen and extensin family protein C.G. S.X.
0.14 6e-2 38 Zm.9049.1.A1_x_at BM074810 - - 8e-3 At5g38940 manganese ion binding / nutrient reservoir C.G. S.X.
0.04 2e-1 36 Zm.6671.1.S1_a_at BM379927 germin-like protein 1 - 7e+0 At3g23167 LCR39 (Low-molecular-weight cysteine-rich 39) C.G. S.X.
0.01 2e-1 36 Zm.463.1.A1_at U95953.1 viviparous14 - 5e-6 At3g14440 NCED3 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 3) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 8e-3 42 Arabidopsis thaliana At5g38910 833883 germin-like protein, putative F:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PFOB - - - C.G. S.X.
0.03 7e-1 36 Glycine max Gma.15398.1.S1_at BG651396 - - 2e+0 At4g34780 auxin-responsive family protein C.G. S.X.
0.49 2e-32 139 Hordeum vulgare Contig1518_at Contig1518 - - 3e-2 At3g05950 germin-like protein, putative C.G. S.X.
0.35 1e-18 95 Oryza sativa Os08g0231400 AK059812.1 - Germin family protein 2e+0 At5g39110 germin-like protein, putative C.G. S.X.
0.05 3e+0 34 Populus trichocarpa PtpAffx.216683.1.S1_s_at pmrna31628 hypothetical protein - 3e-6 At5g38950 germin-like protein-related C.G. S.X.
0.54 0 795 Triticum aestivum TaAffx.112486.1.S1_at CA624187 - - 4e+0 At3g62020 GLP10 (GERMIN-LIKE PROTEIN 10) C.G. S.X.
0.03 1e+1 30 Vitis vinifera 1618072_at BQ795452 hypothetical protein LOC100249965 - 9e-1 At5g19151 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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