Gene omics information

Query gene ID	Zm.8336.1.S1_x_at
Gene name	NAS1 protein
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	85.8	Zm.8336.1.S1_x_at	AB061270.1	NAS1 protein	-	4e+0	At2g44360	unknown protein	S.X.	H.G.	Please select
0.60	77.8	Zm.5834.1.A1_a_at	BM335098	-	-	6e+0	At4g01260	transcription regulator	S.X.	H.G.	Please select
0.50	65.7	Zm.19306.1.A1_at	AI664819	hypothetical protein LOC100193355	-	6e-1	At4g13720	inosine triphosphate pyrophosphatase, putative / HAM1 family protein	S.X.	H.G.	Please select
0.46	58.4	Zm.2321.6.A1_at	AI677502	hypothetical protein LOC100277354	-	3e-3	At3g28970	AAR3 (antiauxin-resistant 3)	S.X.	H.G.	Please select
0.43	52.8	Zm.2330.1.S1_at	BE552610	-	-	4e-15	At2g42120	POLD2 (DNA POLYMERASE DELTA SMALL SUBUNIT)	S.X.	H.G.	Please select
0.39	45.6	Zm.17192.1.A1_at	BM339467	-	-	5e+0	At2g22520	unknown protein	S.X.	H.G.	Please select
0.38	44.2	Zm.13427.1.S1_at	AF124738.1	hypothetical protein LOC100194389	-	1e-7	At4g21520	transducin family protein / WD-40 repeat family protein	S.X.	H.G.	Please select
0.36	41.3	Zm.3808.1.S1_at	CF010880	low-molecular-weight cysteine-rich protein LCR68	-	5e+0	At4g02850	phenazine biosynthesis PhzC/PhzF family protein	S.X.	H.G.	Please select
0.28	28.1	Zm.13871.1.A1_at	AF099434.1	R2R3MYB-domain protein	-	2e-5	At1g08810	MYB60 (myb domain protein 60)	S.X.	H.G.	Please select
0.23	18.6	Zm.3775.1.A1_at	AY103856.1	chaperonin	-	3e-5	At1g14980	CPN10 (CHAPERONIN 10)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
45.9	100.0	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
28.0	99.7	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.1	99.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.3	99.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.9	99.5	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.4	99.5	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.3	99.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.0	99.3	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.0	99.3	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9	97.3	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.94	0	2458	Zm.8336.1.S2_at	AB061270.1	NAS1 protein	-	4e+0	At2g44360	unknown protein	C.G.	S.X.	Please select
0.94	0	2458	Zm.8336.1.S1_at	AB061270.1	NAS1 protein	-	4e+0	At2g44360	unknown protein	C.G.	S.X.	Please select
0.43	0	1031	Zm.10316.1.S1_at	AB061271.2	NAS2 protein	-	1e+1	At5g04950	NAS1 (NICOTIANAMINE SYNTHASE 1)	C.G.	S.X.	Please select
0.41	0	732	Zm.4166.1.A1_at	BG841131	hypothetical protein LOC100191831	-	1e+0	At1g17145	protein binding / zinc ion binding	C.G.	S.X.	Please select
0.07	7e-9	61	Zm.9637.1.A1_at	BM334419	-	-	4e-1	At1g31060	unknown protein	C.G.	S.X.	Please select
0.02	2e-6	54	Zm.6913.2.A1_a_at	AI065646	-	-	9e-1	At2g16060	AHB1 (ARABIDOPSIS HEMOGLOBIN 1)	C.G.	S.X.	Please select
0.02	2e-6	54	Zm.12936.1.A1_at	AY108987.1	-	-	7e-1	At3g21338	unknown protein	C.G.	S.X.	Please select
0.02	2e-6	54	Zm.12227.1.S1_at	AY104350.1	heat shock cognate 70 kDa protein 2	-	2e-53	At3g09440	heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3)	C.G.	S.X.	Please select
0.02	2e-6	54	Zm.12295.2.S1_a_at	CD441109	stress responsive protein	-	2e-2	At2g39050	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	4e+0	34	Arabidopsis thaliana	At2g44360	819043	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	2e-5	52	Glycine max	GmaAffx.12286.2.S1_at	BM108265	-	-	1e-11	At5g38510	rhomboid family protein	C.G.	S.X.	Please select
0.44	2e-117	422	Hordeum vulgare	AB019525_at	AB019525	-	-	1e-2	At1g56430	NAS4 (NICOTIANAMINE SYNTHASE 4)	C.G.	S.X.	Please select
0.44	3e-147	523	Oryza sativa	Os03g0307200	AB023818.1	-	Nicotianamine synthase 1 (EC 2.5.1.43)(S-adenosyl-L-methionine:S-adenosyl-L-methionine:S-adenosyl-methionine 3-amino-3-carboxypropyltransferase 1) (HvNAS1)	7e-1	At5g49170	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	6e-3	44	Populus trichocarpa	PtpAffx.90645.2.S1_at	CX657409	-	-	1e+0	At5g04750	F1F0-ATPase inhibitor protein, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.38	1e-46	188	Triticum aestivum	Ta.5145.1.S1_at	BJ282340	-	-	1e+1	At1g76405	unknown protein	C.G.	S.X.	Please select
0.02	1e-6	54	Vitis vinifera	1614133_at	CD711415	hypothetical protein LOC100255873	-	5e-2	At1g43800	acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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