Gene omics information

Query gene ID	Zm.8326.1.A1_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.85	95.9	Zm.8326.1.A1_at	BM073693	-	-	1e+0	At5g07100	WRKY26	S.X.	H.G.	Please select
0.92	99.2	Zm.1461.1.A1_at	BM267604	-	-	4e-1	At2g40380	PRA1.B2 (PRENYLATED RAB ACCEPTOR 1.B2)	S.X.	H.G.	Please select
0.91	99.0	Zm.11814.1.A1_at	BM380947	copper transporter 1	-	1e+1	At4g01150	unknown protein	S.X.	H.G.	Please select
0.91	99.0	Zm.15425.2.A1_at	CO521234	-	-	4e-1	At1g09760	U2A' (U2 small nuclear ribonucleoprotein A)	S.X.	H.G.	Please select
0.90	97.0	Zm.8898.1.A1_at	AI737203	serine/threonine-protein kinase SNT7	-	1e-36	At1g68830	STN7 (Stt7 homolog STN7)	S.X.	H.G.	Please select
0.89	96.8	Zm.999.1.A1_at	CK370133	60S ribosomal protein L34	-	3e-4	At1g26880	60S ribosomal protein L34 (RPL34A)	S.X.	H.G.	Please select
0.86	96.3	Zm.4683.1.A1_at	CA401684	-	-	8e+0	At3g10020	unknown protein	S.X.	H.G.	Please select
0.85	95.9	Zm.15334.1.A1_at	CB351107	hypothetical protein LOC100277432	-	5e+0	At1g01570	fringe-related protein	S.X.	H.G.	Please select
0.84	95.8	Zm.8706.1.A1_at	BM075281	-	-	4e+0	At4g05050	UBQ11 (UBIQUITIN 11)	S.X.	H.G.	Please select
0.80	94.0	Zm.8148.1.A1_at	BM073081	-	-	6e-13	At3g58190	LBD29 (LATERAL ORGAN BOUNDARIES-DOMAIN 29)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
40.1	99.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
38.7	99.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
36.5	99.9	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
29.4	99.8	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
28.5	99.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.8	99.7	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.0	97.7	GSM320464	protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.4	97.5	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.3	97.4	GSM320458	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.2	97.4	GSM320456	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.10	5e-7	54	Zm.16992.1.A1_at	CO528153	hypothetical protein LOC100279570	-	1e+0	At3g28210	PMZ	C.G.	S.X.	Please select
0.05	3e-5	48	Zm.9836.1.A1_at	BM340598	-	-	3e-1	At2g46130	WRKY43	C.G.	S.X.	Please select
0.03	5e-4	44	Zm.1750.1.A1_at	BM073685	hypothetical protein LOC100191630	-	2e-9	At5g28650	WRKY74	C.G.	S.X.	Please select
0.03	2e-3	42	Zm.9098.1.A1_a_at	BM336161	Hypothetical protein LOC100192894	-	6e-6	At4g31550	WRKY11	C.G.	S.X.	Please select
0.03	8e-3	40	Zm.18094.1.A1_at	CF636218	-	-	2e+0	At4g29930	basic helix-loop-helix (bHLH) family protein	C.G.	S.X.	Please select
0.03	3e-2	38	Zm.4272.1.S1_at	AI834123	hypothetical protein LOC100273049	-	7e-16	At4g31550	WRKY11	C.G.	S.X.	Please select
0.02	1e-1	36	Zm.9238.1.A1_at	CO533275	-	-	5e-2	At2g23320	WRKY15	C.G.	S.X.	Please select
0.02	1e-1	36	Zm.4284.1.A1_at	CF634282	hypothetical protein LOC100193400	-	2e+0	At3g28370	unknown protein	C.G.	S.X.	Please select
0.02	5e-1	34	Zm.8726.1.A1_at	BM266883	thaumatin-like protein	-	7e+0	At3g25400	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+0	34	Arabidopsis thaliana	At5g07100	830601	WRKY26	Encodes WRKY DNA-binding protein 26 (WRKY26).	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e-1	38	Glycine max	GmaAffx.53630.1.S1_s_at	BE584069	-	-	4e+1	At5g01750	unknown protein	C.G.	S.X.	Please select
0.24	4e-57	220	Hordeum vulgare	Contig4387_at	Contig4387	-	-	6e-1	At5g04160	phosphate translocator-related	C.G.	S.X.	Please select
0.29	5e-69	262	Oryza sativa	Os06g0649000	AK106282.1	-	The start codon is not identified.	7e-4	At1g80840	WRKY40	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	6e+0	32	Populus trichocarpa	PtpAffx.224174.1.S1_at	pmrna42459	hypothetical protein	-	9e-1	At3g27640	transducin family protein / WD-40 repeat family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.29	1e-52	206	Triticum aestivum	TaAffx.78545.2.S1_s_at	CA627335	WRKY39 transcription factor	-	4e-3	At4g33780	-	C.G.	S.X.	Please select
0.04	1e-3	42	Vitis vinifera	1614806_s_at	CB343751	hypothetical protein LOC100264507	-	2e-4	At2g25000	WRKY60	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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