Gene omics information

Query gene ID	Zm.8194.1.A1_at
Gene name	hypothetical protein LOC100274820 /// hypothetical protein LOC100276986
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	81.1	Zm.8194.1.A1_at	BM380105	hypothetical protein LOC100274820 /// hypothetical protein LOC100276986	-	7e+0	At5g04750	F1F0-ATPase inhibitor protein, putative	S.X.	H.G.	Please select
0.42	51.3	Zm.17197.2.S1_at	CK144438	hypothetical protein LOC100273140	-	3e-3	At3g51960	bZIP family transcription factor	S.X.	H.G.	Please select
0.35	38.9	Zm.5187.1.A1_at	AY104276.1	hypothetical protein LOC100272983	-	2e-4	At2g04400	indole-3-glycerol phosphate synthase (IGPS)	S.X.	H.G.	Please select
0.34	37.2	Zm.1689.1.S1_at	AW600635	transcriptional corepressor LEUNIG	-	5e+0	At5g40950	RPL27 (RIBOSOMAL PROTEIN LARGE SUBUNIT 27)	S.X.	H.G.	Please select
0.29	28.1	Zm.5326.1.S1_at	AI621902	hypothetical protein LOC100193243	-	2e-11	At3g22190	IQD5 (IQ-domain 5)	S.X.	H.G.	Please select
0.29	28.1	Zm.15995.2.A1_at	AW289130	peptidyl-prolyl cis-trans isomerase CYP19-4	-	1e-18	At5g58710	ROC7	S.X.	H.G.	Please select
0.29	28.1	Zm.16890.1.A1_at	BM381222	hypothetical protein LOC100273286	-	2e+0	At2g41440	unknown protein	S.X.	H.G.	Please select
0.23	18.6	Zm.18435.1.A1_at	CO529704	hypothetical protein LOC100272554	-	4e-7	At5g39830	DEG8	S.X.	H.G.	Please select
0.15	8.6	Zm.4157.1.A1_at	AY106551.1	-	-	3e-1	At2g47950	unknown protein	S.X.	H.G.	Please select
0.14	7.7	Zm.94.1.A1_at	X79934.1	Dof2	-	1e-7	At2g28810	Dof-type zinc finger domain-containing protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.2	98.0	GSM205365	Mo17 13 DAP endosperm tissue biological replicate 1	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
6.3	97.4	GSM205367	Mo17xB73 13 DAP endosperm tissue biological replicate 1	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
6.3	97.4	GSM205373	Mo17 13 DAP endosperm tissue biological replicate 3	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.7	97.2	GSM205369	Mo17 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.5	97.1	GSM205371	Mo17xB73 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.3	96.9	GSM205375	Mo17xB73 13 DAP endosperm tissue biological replicate 3	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.8	96.6	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.1	95.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.9	95.7	GSM205431	Mo17 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
3.8	95.5	GSM205424	Mo17 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.13	6e-14	77	Zm.988.1.S1_at	CD433236	-	-	2e+0	At5g24510	60s acidic ribosomal protein P1, putative	C.G.	S.X.	Please select
0.02	2e-1	36	Zm.2055.2.S1_at	CK826991	-	-	2e-2	At4g00830	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please select
0.02	2e-1	36	Zm.2055.2.A1_a_at	CK826991	hypothetical protein LOC100279012	-	2e-2	At4g00830	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please select
0.02	8e-1	34	Zm.7988.1.A1_at	BQ539266	-	-	1e+0	At4g16600	transferase, transferring glycosyl groups / transferase, transferring hexosyl groups	C.G.	S.X.	Please select
0.02	8e-1	34	Zm.6822.1.S1_at	CF009268	receptor expression-enhancing protein 3	-	4e-2	At5g42560	abscisic acid-responsive HVA22 family protein	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.6032.1.A1_at	AI668502	hypothetical protein LOC100192630	-	9e-1	At4g11600	ATGPX6 (GLUTATHIONE PEROXIDASE 6)	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.5117.1.A1_at	AI600920	hypothetical protein LOC100276666	-	2e+0	At4g36420	ribosomal protein L12 family protein	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.3755.1.A1_at	AY104091.1	derlin2-2	-	8e-13	At4g21810	DER2.1 (DERLIN-2.1)	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.3755.1.A1_a_at	AY104091.1	derlin2-1 /// derlin2-2	-	8e-13	At4g21810	DER2.1 (DERLIN-2.1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	7e+0	32	Arabidopsis thaliana	At5g04750	830353	F1F0-ATPase inhibitor protein, putative	F:ATPase inhibitor activity;P:unknown;C:unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	3e+0	34	Glycine max	GmaAffx.69370.2.S1_at	BM893203	-	-	7e-1	At4g30070	LCR59 (Low-molecular-weight cysteine-rich 59)	C.G.	S.X.	Please select
0.16	4e-18	91	Hordeum vulgare	Contig15162_at	Contig15162	-	-	1e-1	At3g22990	LFR (LEAF AND FLOWER RELATED)	C.G.	S.X.	Please select
0.26	6e-36	153	Oryza sativa	Os05g0593200	AK059115.1	-	Hypothetical protein	4e-1	At5g46730	glycine-rich protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	6e-1	36	Populus trichocarpa	Ptp.1128.1.A1_at	CK090359	-	-	4e+0	At4g22180	F-box family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.16	2e-16	87	Triticum aestivum	TaAffx.8261.1.S1_at	BJ306212	-	-	4e-1	At1g20220	nucleic acid binding	C.G.	S.X.	Please select
0.06	4e-2	38	Vitis vinifera	1617412_at	CD798824	-	-	1e-3	At1g55160	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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