Gene omics information

Query gene ID Zm.8180.1.S1_at
Gene name Starch synthase isoform zSTSII-1
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.8180.1.S1_atCF006239Starch synthase isoform zSTSII-1-8e-18At3g01180AtSS2 (starch synthase 2)S.X.H.G.
0.6785.8Zm.2686.1.A1_atCB351222NADPH adrenodoxin oxidoreductase-1e-2At4g32360NADP adrenodoxin-like ferredoxin reductaseS.X.H.G.
0.4048.5Zm.790.1.A1_atAY103831.1hypothetical protein LOC100274633-2e+0At1g07900LBD1 (LOB DOMAIN-CONTAINING PROTEIN 1)S.X.H.G.
0.2724.6Zm.12929.1.S1_atCA401841hypothetical protein LOC100277281-8e+0At2g06908unknown proteinS.X.H.G.
0.2216.9Zm.5093.1.A1_atAI600800GAGA-binding protein-4e-4At1g14685BPC2 (BASIC PENTACYSTEINE 2)S.X.H.G.
0.062.3Zm.13648.1.S1_atAY107241.1caleosin related protein-2e+0At1g70670caleosin-related family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
21.999.4GSM205369Mo17 13 DAP endosperm tissue biological replicate 2GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
21.499.4GSM205366B73 13 DAP endosperm tissue biological replicate 1GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
19.599.3GSM205371Mo17xB73 13 DAP endosperm tissue biological replicate 2GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
19.299.3GSM205372B73xMo17 13 DAP endosperm tissue biological replicate 2GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
18.799.2GSM205365Mo17 13 DAP endosperm tissue biological replicate 1GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
18.399.2GSM205368B73xMo17 13 DAP endosperm tissue biological replicate 1GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
16.499.0GSM205367Mo17xB73 13 DAP endosperm tissue biological replicate 1GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
15.899.0GSM205370B73 13 DAP endosperm tissue biological replicate 2GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
14.898.9GSM205373Mo17 13 DAP endosperm tissue biological replicate 3GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
13.598.8GSM205375Mo17xB73 13 DAP endosperm tissue biological replicate 3GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.102e-69264Zm.423.1.S1_atAF019297.1starch synthase isoform zSTSII-2-3e-7At3g01180AtSS2 (starch synthase 2)C.G.S.X.
0.021e-242Zm.3975.1.S1_atAY104816.15a2 protein-2e+1At5g20520WAV2 (WAVY GROWTH 2)C.G.S.X.
0.015e-240Zm.8277.1.S1_atBM073493Granule bound starch synthase IIa precursor-2e-20At1g32900starch synthase, putativeC.G.S.X.
0.017e-136Zm.8130.1.A1_atCK369071hypothetical protein LOC100277641-1e+0At5g64800CLE21 (CLAVATA3/ESR-RELATED 21)C.G.S.X.
0.027e-136Zm.5458.1.A1_atAY105574.1starch synthase IIc precursor-2e+0At3g01940unknown proteinC.G.S.X.
0.017e-136Zm.17981.1.A1_atCK827727hypothetical protein LOC100277738-5e+0At2g47520AP2 domain-containing transcription factor, putativeC.G.S.X.
0.017e-136Zm.14092.1.S1_atCA399825mitotic checkpoint protein-8e-4At5g49880mitotic checkpoint family proteinC.G.S.X.
0.017e-136Zm.12134.3.A1_a_atAI737095waxy1-2e+0At4g08691unknown proteinC.G.S.X.
0.013e+034Zm.928.1.S1_atCO528002Hypothetical protein LOC100194063-5e-17At5g65260polyadenylate-binding protein family protein / PABP family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.048e-1893Arabidopsis thalianaAt3g01180820294AtSS2 (starch synthase 2)F:transferase activity, transferring glycosyl groups;P:cellulose biosynthetic process, glucan biosynthetic process, biosynthetic process, glycogen biosynthetic process;C:chloroplast;OPBMFAV---C.G.S.X.
0.034e-552Glycine maxGmaAffx.76023.1.S1_atAW759569--3e-20At3g01180AtSS2 (starch synthase 2)C.G.S.X.
0.164e-98359Hordeum vulgareContig20469_atContig20469--5e+0At4g00100ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A)C.G.S.X.
0.4101346Oryza sativaOs06g0229800AF419099.1-Starch synthase isoform zSTSII-1 (EC 2.4.1.21)(Fragment)7e-9At3g01180AtSS2 (starch synthase 2)C.G.S.X.
0.055e-20101Populus trichocarpaPtpAffx.66989.1.S1_atCK103741hypothetical protein-1e-17At3g01180AtSS2 (starch synthase 2)C.G.S.X.
0.4301221Triticum aestivumTa.55.1.S1_x_atAF155217.2starch synthase IIA /// starch synthase IIa-2-3e-11At3g01180AtSS2 (starch synthase 2)C.G.S.X.
0.012e+034Vitis vinifera1613973_atAY037918.1--9e+0At2g03180unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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