Gene omics information

Query gene ID Zm.80.1.A1_at
Gene name beta-amylase
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8395.6Zm.80.1.A1_atCD972407beta-amylase-6e-2At2g32290BAM6 (BETA-AMYLASE 6)S.X.H.G.
0.7087.0Zm.10767.1.A1_atBQ539471short-chain dehydrogenase/reductase SDR-3e-1At2g14060S-adenosyl-L-methionine:carboxyl methyltransferase family proteinS.X.H.G.
0.7087.0Zm.6731.1.A1_atAI395998hypothetical protein LOC100279494-1e-14At1g50670OTU-like cysteine protease family proteinS.X.H.G.
0.6785.8Zm.9356.2.A1_a_atCF626812--1e-6At1g74260PUR4 (purine biosynthesis 4)S.X.H.G.
0.6785.8Zm.7526.1.A1_atBM078809hypothetical protein LOC100194111-8e-2At3g02050KUP3 (K+ UPTAKE TRANSPORTER 3)S.X.H.G.
0.6785.8Zm.10200.2.A1_atBM078569--1e+0At5g57990UBP23 (UBIQUITIN-SPECIFIC PROTEASE 23)S.X.H.G.
0.6481.7Zm.7782.1.A1_atBM079881--3e-1At5g66250kinectin-relatedS.X.H.G.
0.5976.1Zm.8732.1.A1_atBM347474esterase-3e+0At5g53030unknown proteinS.X.H.G.
0.5976.1Zm.3493.1.S1_atCF243629hypothetical protein LOC100192977-9e-25At1g13270MAP1C (METHIONINE AMINOPEPTIDASE 1B)S.X.H.G.
0.5875.1Zm.835.2.A1_a_atCF633042hypothetical protein LOC100191164-3e-1At2g28550RAP2.7 (RELATED TO AP2.7)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
26.699.7GSM253258ZM_2d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
26.399.7GSM253256ZM_2d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
23.199.5GSM253257ZM_2d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
7.397.8GSM253259ZM_2d_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
6.897.6GSM253265ZM_4d_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
6.597.5GSM253247ZM_12h_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
5.997.3GSM253244ZM_12h_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
5.296.9GSM253262ZM_4d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
4.596.3GSM253250ZM_24h_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
4.496.2GSM258174B84 11-day seedling aerial tissue biological replicate 1GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.026e-342Zm.2278.1.S1_atBF727982acid phosphatase/vanadium-dependent haloperoxidase related-7e-3At1g67600-C.G.S.X.
0.011e-138Zm.1594.1.S1_atAF532781.1hypothetical LOC541975-4e-27At3g18290EMB2454 (embryo defective 2454)C.G.S.X.
0.014e-136Zm.50.1.A1_atD73410.1phospholipase D-6e-34At3g15730PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1)C.G.S.X.
0.014e-136Zm.2724.1.S1_atBQ538519hypothetical protein LOC100193244-3e-13At3g22960PKP-ALPHAC.G.S.X.
0.014e-136Zm.2033.1.A1_atCO524092hypothetical protein LOC100274598-2e+0At1g19160-C.G.S.X.
0.014e-136Zm.17511.1.A1_atCK368673hypothetical protein LOC100194337-1e+0At3g22600protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.012e+034Zm.6956.1.A1_atAI714976hypothetical protein LOC100273212-2e-1At1g07135glycine-rich proteinC.G.S.X.
0.012e+034Zm.4814.1.A1_a_atAI374517glutathione transferase5-2e-1At5g19510elongation factor 1B alpha-subunit 2 (eEF1Balpha2)C.G.S.X.
0.022e+034Zm.4099.2.S1_atAI770849Hypothetical protein LOC100191159-8e-1At2g38870protease inhibitor, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.046e-240Arabidopsis thalianaAt2g32290817789BAM6 (BETA-AMYLASE 6)F:cation binding, beta-amylase activity, catalytic activity;P:cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process;C:chloroplast;PBO---C.G.S.X.
0.129e-859Glycine maxGma.595.1.S1_atAB004271.1beta-amylase-2e-11At2g32290BAM6 (BETA-AMYLASE 6)C.G.S.X.
0.6901263Hordeum vulgareContig1411_s_atContig1411--6e-5At4g15210BAM5 (BETA-AMYLASE 5)C.G.S.X.
0.7501243Oryza sativaOs07g0543300BM418911-Glycoside hydrolase, family 14B, plant protein2e+1At5g43401-C.G.S.X.
0.121e-965Populus trichocarpaPtp.3245.1.S1_s_atCV276464hypothetical protein-7e-14At2g32290BAM6 (BETA-AMYLASE 6)C.G.S.X.
0.6501178Triticum aestivumTa.3.1.S1_atBJ265463beta-amylase-3e-7At4g15210BAM5 (BETA-AMYLASE 5)C.G.S.X.
0.023e-136Vitis vinifera1618947_atCF568981--3e+0At5g06710HAT14 (HOMEOBOX FROM ARABIDOPSIS THALIANA)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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