Gene omics information

Query gene ID Zm.777.1.S1_a_at
Gene name hypothetical protein LOC100272376
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5674.4Zm.777.1.S1_a_atCD442368hypothetical protein LOC100272376-4e-8At5g633804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinS.X.H.G.
0.6785.8ZmAffx.774.1.A1_atAI746198hypothetical protein LOC100279501-2e+0At2g41000heat shock protein bindingS.X.H.G.
0.6481.7Zm.2615.1.S1_atCO533179hypothetical protein LOC100279288-5e-5At3g54180CDKB1S.X.H.G.
0.5571.6Zm.2763.1.S1_atAW067129hypothetical protein LOC100191545-9e-7At1g19710glycosyl transferase family 1 proteinS.X.H.G.
0.5065.7ZmAffx.1299.1.S1_at40794996-27--0Atmg00580-S.X.H.G.
0.3945.6ZmAffx.1489.1.S1_at11990232-46--0Atcg00680-S.X.H.G.
0.3641.3Zm.8664.1.A1_atBM338299hypothetical protein LOC100274639-2e+0At2g14890AGP9 (ARABINOGALACTAN PROTEIN 9)S.X.H.G.
0.2928.1Zm.6275.1.S1_a_atAF540907.1benzoxazin6-7e-1At1g066402-oxoglutarate-dependent dioxygenase, putativeS.X.H.G.
0.2521.3Zm.14692.1.A1_s_atBQ539260hypothetical protein LOC100276042-5e+0At1g09195-S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
16.899.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.798.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.998.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.398.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.998.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.498.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.198.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.298.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.697.1GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.396.1GSM202290Mo17 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.026e-238Zm.15442.1.A1_atBM379425Light-harvesting chlorophyll a/b binding protein-9e-37At2g34420LHB1B2C.G.S.X.
0.016e-238Zm.12246.1.A1_atBM379517growth inhibition and differentiation-related protein 88-4e-2At5g22120unknown proteinC.G.S.X.
0.023e-136Zm.2591.3.A1_x_atCF003515autophagy-related 8b-3e-48At1g62040ATG8C (autophagy 8c)C.G.S.X.
0.023e-136Zm.2591.2.A1_a_atBG836981autophagy-related 8b-2e-52At1g62040ATG8C (autophagy 8c)C.G.S.X.
0.013e-136Zm.13498.1.S1_atAY108746.1membrane protein-2e-4At1g12750ATRBL6 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 6)C.G.S.X.
0.021e+034ZmAffx.1053.1.A1_atAI881846--3e+0At1g16240SYP51 (SYNTAXIN OF PLANTS 51)C.G.S.X.
0.021e+034ZmAffx.1053.1.S1_atAI881846--5e-2At4g37390BRU6C.G.S.X.
0.011e+034Zm.7094.1.A1_a_atAW05422360S ribosomal protein L7a-5e-69At3g6287060S ribosomal protein L7A (RPL7aB)C.G.S.X.
0.011e+034Zm.7094.1.A1_x_atAW05422360S ribosomal protein L7a-5e-69At3g6287060S ribosomal protein L7A (RPL7aB)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.064e-859Arabidopsis thalianaAt5g633808364574-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinEncodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis.---C.G.S.X.
0.075e-240Glycine maxGma.5038.3.S1_s_atAW830151--2e-9At5g633804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinC.G.S.X.
0.391e-99363Hordeum vulgareContig16738_atContig16738--2e-3At1g20510OPCL1 (OPC-8:0 COA LIGASE1)C.G.S.X.
0.474e-53210Oryza sativaOs01g0901500BI813803-4-coumarate-CoA ligase-like protein9e-1At5g633804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinC.G.S.X.
0.102e-757Populus trichocarpaPtpAffx.13512.2.S1_atCV257679acyl:coa ligase-7e-6At5g633804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinC.G.S.X.
0.333e-55216Triticum aestivumTaAffx.97935.1.S1_atBQ801609--4e-4At1g20510OPCL1 (OPC-8:0 COA LIGASE1)C.G.S.X.
0.132e-1375Vitis vinifera1610552_atCF201894.1--5e-10At5g633804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage