CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.7765.1.A1_at

Gene name

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.93 99.3 Zm.7765.1.A1_at BQ539662 - - 3e-1 At1g53170 ERF8 S.X. H.G.
0.69 86.5 Zm.5860.4.A1_a_at AI759079 mitochondrial-processing peptidase beta subunit - 3e+0 At4g19910 Toll-Interleukin-Resistance (TIR) domain-containing protein S.X. H.G.
0.67 85.8 Zm.8237.1.A1_a_at CB240143 hypothetical protein LOC100276701 - 3e-1 At1g16916 unknown protein S.X. H.G.
0.67 85.8 Zm.6648.1.S1_at AY108962.1 hypothetical protein LOC100272455 - 7e+0 At5g64900 PROPEP1 S.X. H.G.
0.63 81.1 Zm.19204.1.S1_at CA404362 protein phosphatase 2C-like - 1e-3 At1g09160 protein phosphatase 2C-related / PP2C-related S.X. H.G.
0.58 75.1 Zm.8732.1.A1_at BM347474 esterase - 3e+0 At5g53030 unknown protein S.X. H.G.
0.57 75.1 Zm.5860.4.S1_at AI759079 - - 3e+0 At4g19910 Toll-Interleukin-Resistance (TIR) domain-containing protein S.X. H.G.
0.56 74.4 Zm.2770.1.A1_at BM380104 hypothetical protein LOC100192561 - 1e+0 At2g17860 pathogenesis-related thaumatin family protein S.X. H.G.
0.56 74.4 Zm.19203.1.S1_at CO520849 hypothetical protein LOC100193957 - 1e-5 At3g07220 transcriptional activator, putative S.X. H.G.
0.53 69.1 Zm.3875.1.S1_at BQ539306 - - 2e-31 At1g50200 ALATS (ALANYL-TRNA SYNTHETASE) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.6 97.1 GSM202295 Mo17xB73 immature ear tissue, biological replicate 1 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.1 96.8 GSM202322 B73x Mo17 19 day after pollination embryo tissue, biological replicate 3 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
4.9 96.7 GSM202299 Mo17xB73 immature ear tissue, biological replicate 2 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.7 96.5 GSM202296 B73xMo17 immature ear tissue, biological replicate 1 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.6 96.4 GSM202302 B73xMo17 immature ear tissue, biological replicate 2 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.5 96.3 GSM202306 Mo17xB73 immature ear tissue, biological replicate 3 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.4 96.2 GSM202297 Mo17 immature ear tissue, biological replicate 2 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.3 96.1 GSM202320 B73 19 day after pollination embryo tissue, biological replicate 3 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
4.3 96.1 GSM202304 B73 immature ear tissue, biological replicate 3 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.1 95.9 GSM202292 B73 immature ear tissue, biological replicate 1 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.20 9e-58 224 Zm.10842.1.S1_a_at AF493800.1 DRE binding factor 1 - 1e-4 At2g22200 AP2 domain-containing transcription factor C.G. S.X.
0.14 3e-39 163 Zm.13842.1.A1_at AY104042.1 - - 1e-1 At1g06160 ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59) C.G. S.X.
0.06 1e-10 67 Zm.8626.1.A1_at BM348921 hypothetical protein LOC100274398 - 1e+0 At5g61600 ethylene-responsive element-binding family protein C.G. S.X.
0.03 5e-10 65 Zm.18520.1.A1_at CF632042 - - 8e-3 At5g44210 ERF9 (ERF DOMAIN PROTEIN 9) C.G. S.X.
0.09 8e-9 61 Zm.18481.1.A1_at CO525607 - - 2e+1 At5g55570 unknown protein C.G. S.X.
0.02 3e-8 59 Zm.13383.1.S1_at AY178191.1 branched silkless1 - 1e-2 At1g53170 ERF8 C.G. S.X.
0.02 5e-7 56 Zm.2996.1.A1_at BG842506 DNA binding protein - 9e+0 At5g02220 unknown protein C.G. S.X.
0.03 3e-5 50 Zm.12317.1.S1_at AY106969.1 ethylene-responsive transcription factor 4 - 2e-12 At5g44210 ERF9 (ERF DOMAIN PROTEIN 9) C.G. S.X.
0.02 5e-4 46 Zm.17956.1.A1_at CF637428 - - 2e+0 At3g20570 plastocyanin-like domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-1 38 Arabidopsis thaliana At1g53170 841751 ERF8 encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-8). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. - - - C.G. S.X.
0.06 1e-13 79 Glycine max Gma.1187.1.S1_at AW350683 - - 9e-9 At1g36060 AP2 domain-containing transcription factor, putative C.G. S.X.
0.35 2e-99 363 Hordeum vulgare Contig4317_at Contig4317 - - 2e-1 At1g36060 AP2 domain-containing transcription factor, putative C.G. S.X.
0.38 8e-108 393 Oryza sativa Os09g0369000 AK070758.1 - AP2 domain transcription factor RAP2.3 (Related toAP2 protein 3) (Cadmium-induced protein AS30) 3e-4 At1g71130 AP2 domain-containing transcription factor, putative C.G. S.X.
0.02 2e+0 36 Populus trichocarpa PtpAffx.213831.1.S1_at pmrna26990 AP2/ERF domain-containing transcription factor - 5e-13 At1g80580 ethylene-responsive element-binding family protein C.G. S.X.
0.31 0 712 Triticum aestivum Ta.23923.1.S1_at CA626961 - - 3e-1 At4g17245 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.03 1e-3 44 Vitis vinifera 1611910_s_at AY395745.1 similar to putative ethylene response factor ERF3b - 9e-14 At3g15210 ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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