Gene omics information

Query gene ID	Zm.774.1.S1_at
Gene name	hypothetical protein LOC100191508
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.96	99.8	Zm.774.1.S1_at	CF625446	hypothetical protein LOC100191508	-	2e-17	At4g14160	transport protein, putative	S.X.	H.G.	Please select
0.47	59.9	Zm.12150.1.S1_at	AY106576.1	60S ribosomal protein L30	-	7e-15	At1g36240	60S ribosomal protein L30 (RPL30A)	S.X.	H.G.	Please select
0.44	55.7	Zm.1359.1.S1_at	L20139.1	male gametophyte-specific2	-	3e-6	At3g01270	pectate lyase family protein	S.X.	H.G.	Please select
0.44	55.7	Zm.12293.1.S1_at	CN844282	hypothetical protein LOC100272936	-	2e-1	At3g17160	unknown protein	S.X.	H.G.	Please select
0.39	45.6	Zm.2961.3.S1_at	AW119963	-	-	2e+0	At5g25570	unknown protein	S.X.	H.G.	Please select
0.39	45.6	Zm.811.1.A1_at	CA405132	cathepsin B-like cysteine proteinase 3	-	2e-23	At1g02305	cathepsin B-like cysteine protease, putative	S.X.	H.G.	Please select
0.39	45.6	Zm.16049.2.A1_at	CF042888	-	-	3e-4	At5g03850	40S ribosomal protein S28 (RPS28B)	S.X.	H.G.	Please select
0.39	45.6	Zm.8551.1.A1_at	BM333970	-	-	2e+0	At5g57290	60S acidic ribosomal protein P3 (RPP3B)	S.X.	H.G.	Please select
0.39	45.6	Zm.17659.1.A1_at	CF629386	acyl-CoA-binding protein	-	7e-17	At1g31812	ACBP6 (acyl-CoA-binding protein 6)	S.X.	H.G.	Please select
0.35	38.9	Zm.18241.1.S1_at	AI738184	PP protein	-	7e-29	At4g31750	WIN2 (HOPW1-1-INTERACTING 2)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
24.4	99.6	GSM320470	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.5	99.4	GSM320465	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.4	99.1	GSM320467	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.3	99.0	GSM320466	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.8	98.5	GSM320469	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.0	98.4	GSM320468	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.5	96.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.4	96.2	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.9	95.7	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.7	95.4	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.32	5e-155	547	Zm.11863.1.A1_at	AY104184.1	-	-	2e+0	At3g06780	glycine-rich protein	C.G.	S.X.	Please select
0.18	1e-128	460	Zm.813.2.A1_at	AY103619.1	-	-	5e-15	At4g14160	transport protein, putative	C.G.	S.X.	Please select
0.05	3e-8	59	Zm.813.1.S1_at	AF244683.1	glutathione S-transferase GST 18	-	3e+0	At2g46330	AGP16 (ARABINOGALACTAN PROTEIN 16)	C.G.	S.X.	Please select
0.05	8e-6	52	Zm.10771.1.A1_at	AI619403	hypothetical protein LOC100272564	-	3e+0	At4g16240	unknown protein	C.G.	S.X.	Please select
0.01	2e-3	44	Zm.17015.1.S1_at	CO532022	hypothetical protein LOC100280074	-	4e-2	At5g37200	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.01	8e-3	42	Zm.18349.1.A1_at	CO532803	-	-	9e+0	At4g11350	transferase, transferring glycosyl groups	C.G.	S.X.	Please select
0.02	3e-2	40	Zm.17446.1.A1_at	CK347991	hypothetical protein LOC100191157	-	2e-3	At3g13430	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.01	1e-1	38	ZmAffx.1184.1.S1_at	AW927978	hypothetical protein LOC100273162	-	1e-2	At2g38640	unknown protein	C.G.	S.X.	Please select
0.01	1e-1	38	ZmAffx.1184.1.A1_at	AW927978	-	-	1e-2	At2g38640	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e-17	91	Arabidopsis thaliana	At4g14160	827055	transport protein, putative	F:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	2e+0	36	Glycine max	PsAffx.C7000053_at	PsAffx.C7000053	-	-	7e+0	At4g13090	xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative	C.G.	S.X.	Please select
0.11	8e-65	248	Hordeum vulgare	Contig4761_at	Contig4761	-	-	2e-8	At1g05520	transport protein, putative	C.G.	S.X.	Please select
0.16	2e-34	149	Oryza sativa	Os01g0276600	AK071739.1	-	Zn-finger, RING domain containing protein	4e-2	At4g05070	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	2e+0	36	Populus trichocarpa	PtpAffx.215079.1.S1_at	pmrna29044	hypothetical protein	-	4e-78	At3g23660	transport protein, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.23	7e-141	502	Triticum aestivum	Ta.26662.1.A1_a_at	CD491499	-	-	3e-17	At4g14160	transport protein, putative	C.G.	S.X.	Please select
0.01	1e+0	34	Vitis vinifera	1619140_at	CF606031	hypothetical protein LOC100246049	-	4e-4	At2g35270	DNA-binding protein-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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