Gene omics information

Query gene ID	Zm.7736.1.S1_at
Gene name	maize insect resistance2
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	88.2	Zm.7736.1.S1_at	AF019146.1	maize insect resistance2	-	4e-3	At2g34080	cysteine proteinase, putative	S.X.	H.G.	Please select
0.40	48.5	Zm.505.2.A1_a_at	AI665681	Glucose translocator1	-	8e-1	Atcg00800	-	S.X.	H.G.	Please select
0.40	48.5	Zm.7080.2.A1_a_at	AI600556	hypothetical protein LOC100194057	-	1e-19	At1g57660	60S ribosomal protein L21 (RPL21E)	S.X.	H.G.	Please select
0.17	10.6	Zm.10346.2.A1_a_at	AI712193	-	-	2e+0	At4g33690	unknown protein	S.X.	H.G.	Please select
0.17	10.6	Zm.3508.1.S1_at	BQ619526	SC3 protein	-	3e-11	At2g20840	secretory carrier membrane protein (SCAMP) family protein	S.X.	H.G.	Please select
0.15	8.6	Zm.2683.1.A1_at	AW066844	hypothetical protein LOC100274215	-	4e+0	At4g03505	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
14.7	98.9	GSM375791	Deep-sowing 10d treatment GA3, biological rep1	GSE15048	Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
12.1	98.6	GSM375796	Deep-sowing 10d treatment GA3, biological rep2	GSE15048	Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
8.9	98.2	GSM385709	Deep-sowing 10d treatment TIBA, biological rep1	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
8.8	98.1	GSM385707	Deep-sowing 10d treatment IAA, biological rep1	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
8.7	98.1	GSM385708	Deep-sowing 10d treatment IAA, biological rep2	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
7.7	97.9	GSM385710	Deep-sowing 10d treatment TIBA, biological rep2	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
6.6	97.6	GSM253281	ZM_8d_SG200_3Alu_II	GSE10023	Maize gene expression during infection with Ustilago maydis
6.5	97.5	GSM375795	Deep-sowing 10d treatment Control, biological rep2	GSE15048	Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
6.0	97.3	GSM253280	ZM_8d_SG200_3Alu_I	GSE10023	Maize gene expression during infection with Ustilago maydis
5.4	97.0	GSM206309	Lower pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.29	1e-41	171	Zm.456.1.S1_at	AF019145.2	maize insect resistance1	-	5e-2	At4g11320	cysteine proteinase, putative	C.G.	S.X.	Please select
0.11	3e-20	99	Zm.14139.1.A1_at	BG266248	xylem cysteine proteinase 2	-	8e-4	At1g20850	XCP2 (xylem cysteine peptidase 2)	C.G.	S.X.	Please select
0.18	5e-16	85	Zm.5987.1.A2_at	AF019147.1	cysteine protease component of protease-inhibitor complex	-	7e-14	At5g43060	cysteine proteinase, putative / thiol protease, putative	C.G.	S.X.	Please select
0.18	5e-16	85	Zm.5987.1.A2_a_at	AF019147.1	cysteine protease 1 /// cysteine protease 1 /// cysteine proteinase Mir3	-	7e-14	At5g43060	cysteine proteinase, putative / thiol protease, putative	C.G.	S.X.	Please select
0.18	5e-16	85	Zm.5987.1.A1_at	BM075175	cysteine protease 1	-	7e-14	At5g43060	cysteine proteinase, putative / thiol protease, putative	C.G.	S.X.	Please select
0.08	7e-15	81	Zm.5987.2.A1_at	BQ619148	cysteine protease 1	-	1e-11	At3g19390	cysteine proteinase, putative / thiol protease, putative	C.G.	S.X.	Please select
0.04	4e-13	75	Zm.14983.2.A1_at	AY109416.1	-	-	3e-5	At5g27150	NHX1 (NA+/H+ EXCHANGER)	C.G.	S.X.	Please select
0.03	4e-13	75	Zm.14983.2.S1_at	CO524096	-	-	5e-10	At3g05030	NHX2 (SODIUM HYDROGEN EXCHANGER 2)	C.G.	S.X.	Please select
0.10	3e-11	69	Zm.9879.2.S1_at	CA404875	vignain	-	5e-5	At4g35350	XCP1 (XYLEM CYSTEINE PEPTIDASE 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	4e-3	44	Arabidopsis thaliana	At2g34080	817969	cysteine proteinase, putative	F:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e-2	42	Glycine max	PsAffx.CL921Contig1_at	PsAffx.CL921Contig1	-	-	6e+0	At3g11260	WOX5 (WUSCHEL RELATED HOMEOBOX 5)	C.G.	S.X.	Please select
0.12	3e-5	50	Hordeum vulgare	Contig5281_at	Contig5281	-	-	1e-2	At3g48340	cysteine-type endopeptidase/ cysteine-type peptidase	C.G.	S.X.	Please select
0.16	1e-16	89	Oryza sativa	Os04g0670500	AK107506.1	-	Cysteine proteinase GP-II (EC 3.4.22.-)	9e-1	At3g49340	cysteine proteinase, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	3e-1	38	Populus trichocarpa	Ptp.6016.1.S1_at	CV243884	hypothetical protein	-	2e-16	At1g47128	RD21 (responsive to dehydration 21)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.29	2e-122	440	Triticum aestivum	Ta.17784.1.S1_at	CA624339	-	-	3e-1	At2g42130	unknown protein	C.G.	S.X.	Please select
0.04	3e-1	36	Vitis vinifera	1608456_at	CB971487	hypothetical protein LOC100250141	-	4e-14	At5g50260	cysteine proteinase, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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