CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.7732.1.A1_at

Gene name benzoate carboxyl methyltransferase

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 77.8 Zm.7732.1.A1_at BQ538322 benzoate carboxyl methyltransferase - 3e-2 At3g21950 methyltransferase S.X. H.G.
0.67 85.8 Zm.1778.1.A1_at AW438152 hypothetical protein LOC100277199 - 7e+0 At2g20453 unknown protein S.X. H.G.
0.61 79.5 Zm.6779.2.S1_a_at AY107207.1 - - 3e+0 At4g21460 unknown protein S.X. H.G.
0.52 67.3 Zm.9720.1.A1_at BM336624 - - 4e+0 At5g35300 unknown protein S.X. H.G.
0.47 59.9 Zm.16146.1.A1_at CF632443 hypothetical protein LOC100192115 - 3e+0 At5g47630 mtACP3 (mitochondrial acyl carrier protein 3) S.X. H.G.
0.44 55.7 Zm.48.1.S1_at D31905.1 mgp1 GTP-binding protein - 6e-25 At5g60860 AtRABA1f (Arabidopsis Rab GTPase homolog A1f) S.X. H.G.
0.44 55.7 Zm.10792.1.A1_at AY106092.1 hypothetical protein LOC100280420 - 2e+0 At5g64905 PROPEP3 (Elicitor peptide 3 precursor) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
21.9 99.4 GSM206289 Upper pulvinus 5 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
20.3 99.3 GSM206295 Lower pulvinus 5 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
17.0 99.1 GSM206290 Upper pulvinus 15 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
13.2 98.8 GSM206287 Left pulvinus control total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
12.3 98.7 GSM206293 Right pulvinus control total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
12.1 98.6 GSM206307 Lower pulvinus 5 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
12.0 98.6 GSM206296 Lower pulvinus 15 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
11.8 98.6 GSM206294 Lower pulvinus 2 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
10.7 98.5 GSM206305 Right pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
9.1 98.2 GSM206299 Left pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e-1 36 Zm.13388.1.A1_at AF457984.1 Hypothetical protein LOC100191540 - 6e-1 At4g35610 zinc finger (C2H2 type) family protein C.G. S.X.
0.01 8e-1 34 Zm.17271.1.A1_a_at CF629105 hypothetical protein LOC100191540 - 6e-18 At5g52650 40S ribosomal protein S10 (RPS10C) C.G. S.X.
0.02 8e-1 34 Zm.15861.1.A1_at AW355929 lil3 protein - 8e-2 At5g47110 lil3 protein, putative C.G. S.X.
0.02 8e-1 34 Zm.12223.1.A1_at AI739922 hypothetical protein LOC100279273 - 6e-4 At1g79730 ELF7 (EARLY FLOWERING 7) C.G. S.X.
0.02 8e-1 34 Zm.12223.1.A1_a_at AI739922 hypothetical protein LOC100273854 /// hypothetical protein LOC100279273 - 6e-4 At1g79730 ELF7 (EARLY FLOWERING 7) C.G. S.X.
0.03 8e-1 34 Zm.10136.1.A1_at BM381289 - - 4e+0 At5g15290 integral membrane family protein C.G. S.X.
0.02 3e+0 32 Zm.8037.1.A1_at BM073083 - - 1e+0 At5g58580 ATL63 (ARABIDOPSIS TÓ C.G. S.X.
0.02 3e+0 32 Zm.5860.2.A1_at CF021535 Grx_C4 - glutaredoxin subgroup I - 1e-7 At1g77370 glutaredoxin, putative C.G. S.X.
0.02 3e+0 32 Zm.5313.1.A1_a_at CK347406 60S ribosomal protein L12 - 1e-22 At3g53430 60S ribosomal protein L12 (RPL12B) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e-2 40 Arabidopsis thaliana At3g21950 821753 methyltransferase F:methyltransferase activity;P:response to cadmium ion;C:cellular_component unknown;POBMF - - - C.G. S.X.
0.03 2e-1 38 Glycine max GmaAffx.40164.1.S1_at BE802803 - - 6e-15 At4g16070 lipase class 3 family protein C.G. S.X.
0.05 1e-2 40 Hordeum vulgare Contig24534_at Contig24534 - - 2e-2 At3g53630 unknown protein C.G. S.X.
0.07 1e-3 46 Oryza sativa Os06g0241000 9634.m01322 - SAM dependent carboxyl methyltransferase familyprotein 7e-1 At4g32175 RNA binding C.G. S.X.
0.03 3e+0 34 Populus trichocarpa PtpAffx.73959.1.A1_at DN489199 - - 2e+0 At5g61410 RPE C.G. S.X.
0.03 5e-1 36 Triticum aestivum TaAffx.31027.1.S1_at CA620201 - - 1e-3 At3g15380 choline transporter-related C.G. S.X.
0.03 1e-1 36 Vitis vinifera 1615806_at BQ800314 hypothetical protein LOC100246942 - 6e-4 At1g61930 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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