Gene omics information

Query gene ID Zm.7727.2.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5775.1Zm.7727.2.S1_atCF972330--1e-1At4g13800permease-relatedS.X.H.G.
0.5571.6Zm.16281.2.S1_atCA409032Histone H3.2-9e-21At5g10980histone H3S.X.H.G.
0.4048.5Zm.960.1.S1_atBU093044hypothetical protein LOC100274333-1e-4At2g22830SQE2 (squalene epoxidase 2)S.X.H.G.
0.115.3Zm.13188.1.A1_a_atAY103625.1hypothetical protein LOC100193240 /// hypothetical protein LOC100193556-5e-32At3g11940ATRPS5A (RIBOSOMAL PROTEIN 5A)S.X.H.G.
0.062.3Zm.5113.2.A1_a_atCF633388--1e+0At3g18590plastocyanin-like domain-containing proteinS.X.H.G.
0.051.9Zm.18353.1.A1_atAY111403.1hypothetical protein LOC100280196-2e+0At1g16640transcriptional factor B3 family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
29.999.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.599.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.299.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.799.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.199.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.399.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.599.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.799.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.499.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.997.7GSM320458protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.7601344Zm.7727.2.A1_atBU050759hypothetical protein LOC100272686-1e-1At4g13800permease-relatedC.G.S.X.
0.076e-42171Zm.7727.4.S1_s_atCF972403polyubiquitin containing 7 ubiquitin monomers /// ubiquitin /// polyubiquitin-2e-102At4g05320UBQ10 (POLYUBIQUITIN 10)C.G.S.X.
0.066e-42171Zm.7727.1.S1_s_atCK986121polyubiquitin containing 7 ubiquitin monomers /// ubiquitin /// polyubiquitin-5e-129At5g20620UBQ4C.G.S.X.
0.026e-238Zm.15564.1.A1_atCD446261ZCN11 protein-5e-1At1g18100E12A11C.G.S.X.
0.022e-136Zm.5776.1.A1_atCO520963hypothetical protein LOC100273913-9e-2At2g47140short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.019e-134Zm.8993.1.A1_a_atAI649732hypothetical protein LOC100194128 /// hypothetical protein LOC100194385-2e-27At5g57655xylose isomerase family proteinC.G.S.X.
0.019e-134Zm.8993.1.A1_atAI649732hypothetical protein LOC100194128-2e-27At5g57655xylose isomerase family proteinC.G.S.X.
0.019e-134Zm.4664.1.A1_atAI737885fatty acid elongase-2e-1At2g26640KCS11 (3-KETOACYL-COA SYNTHASE 11)C.G.S.X.
0.013e+032Zm.2037.1.S1_a_atCD219439--2e-1At2g39855unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e-138Arabidopsis thalianaAt4g13800827014permease-relatedF:unknown;P:biological_process unknown;C:plasma membrane;MFPOB---C.G.S.X.
0.023e+034Glycine maxGmaAffx.79845.1.A1_atAI960711--9e-2At1g68030PHD finger protein-relatedC.G.S.X.
0.082e-550Hordeum vulgareContig18809_atContig18809--2e+0At5g66090unknown proteinC.G.S.X.
0.041e-656Oryza sativaOs08g0478500AK099704.1-Peptidase C19, ubiquitin carboxyl-terminalhydrolase 2 family protein2e-3At4g24560UBP16 (UBIQUITIN-SPECIFIC PROTEASE 16)C.G.S.X.
0.033e+034Populus trichocarpaPtpAffx.18907.1.A1_atCV229324hypothetical protein-8e-1At1g68935unknown proteinC.G.S.X.
0.069e-342Triticum aestivumTa.30454.1.A1_atCK209066--2e+0At5g64360DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.029e+030Vitis vinifera1609194_atCF209354--1e-12At5g53020unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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