Gene omics information

Query gene ID	Zm.7704.1.A1_at
Gene name	hypothetical protein LOC100278612
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.72	88.6	Zm.7704.1.A1_at	BM079575	hypothetical protein LOC100278612	-	5e-3	At1g62240	unknown protein	S.X.	H.G.	Please select
0.49	61.9	Zm.10652.1.S1_at	CN844569	hypothetical protein LOC100191856	-	4e-2	At1g23040	hydroxyproline-rich glycoprotein family protein	S.X.	H.G.	Please select
0.44	55.7	Zm.1574.1.S1_at	AY106519.1	-	-	6e-20	At2g24320	unknown protein	S.X.	H.G.	Please select
0.42	51.3	Zm.16315.3.S1_x_at	AI734741	plasma membrane integral protein ZmPIP1-3	-	9e-24	At3g61430	PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A)	S.X.	H.G.	Please select
0.36	41.3	Zm.1940.1.S1_at	AW507032	-	-	5e-1	At4g13615	four F5 protein-related / 4F5 protein-related	S.X.	H.G.	Please select
0.33	36.0	Zm.3735.1.A1_at	AY107167.1	hypothetical protein LOC100277155	-	5e-8	At4g39860	unknown protein	S.X.	H.G.	Please select
0.31	31.6	Zm.18385.1.S1_at	CO530624	hypothetical protein LOC100276763	-	1e-1	At3g47810	MAG1 (MAIGO 1)	S.X.	H.G.	Please select
0.29	28.1	Zm.5481.2.A1_at	AW017536	dek protein	-	1e-3	At3g48710	-	S.X.	H.G.	Please select
0.29	28.1	Zm.13055.1.S1_at	CF637576	-	-	2e-14	At4g14540	NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3)	S.X.	H.G.	Please select
0.25	21.3	Zm.12930.1.S1_at	CA403471	hypothetical protein LOC100191377	-	3e-3	At4g31790	diphthine synthase, putative (DPH5)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.8	98.3	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis
7.0	97.7	GSM253280	ZM_8d_SG200_3Alu_I	GSE10023	Maize gene expression during infection with Ustilago maydis
6.7	97.6	GSM253281	ZM_8d_SG200_3Alu_II	GSE10023	Maize gene expression during infection with Ustilago maydis
4.5	96.3	GSM206332	Lower pulvinus 15 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.3	96.1	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.0	95.8	GSM320443	protocol: mRNA - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.9	95.7	GSM320445	protocol: mRNA - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.6	95.2	GSM206325	Upper pulvinus 5 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.4	94.9	GSM206320	Lower pulvinus 15 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.3	94.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.54	4e-94	343	Zm.7113.1.A1_at	AY107196.1	-	-	6e-1	At5g19090	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.02	4e-2	38	Zm.4160.1.A1_at	CF243936	indole-3-acetate beta-glucosyltransferase	-	1e-2	At4g15550	IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE)	C.G.	S.X.	Please select
0.03	1e-1	36	Zm.9973.1.A1_at	BM350441	-	-	2e+0	At5g08080	SYP132 (SYNTAXIN OF PLANTS 132)	C.G.	S.X.	Please select
0.01	1e-1	36	Zm.383.1.S1_s_at	AF023165.1	leucine-rich repeat transmembrane protein kinase 2	-	1e-22	At3g14350	SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)	C.G.	S.X.	Please select
0.01	1e-1	36	Zm.382.2.A1_at	AY109511.1	Leucine-rich repeat transmembrane protein kinase 2	-	1e-22	At3g14350	SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)	C.G.	S.X.	Please select
0.02	1e-1	36	Zm.13969.1.S1_at	BQ487019	-	-	9e-19	At2g42520	DEAD box RNA helicase, putative	C.G.	S.X.	Please select
0.02	5e-1	34	Zm.4255.1.A1_at	AY112172.1	-	-	2e+0	At5g23750	remorin family protein	C.G.	S.X.	Please select
0.02	5e-1	34	Zm.4255.1.S1_at	AY112172.1	-	-	2e+0	At5g23750	remorin family protein	C.G.	S.X.	Please select
0.01	5e-1	34	Zm.3842.1.S1_at	AW573375	hypothetical protein LOC100277154	-	8e-1	At1g26440	ATUPS5 (ARABIDOPSIS THALIANA UREIDE PERMEASE 5)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	5e-3	42	Arabidopsis thaliana	At1g62240	842521	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	3e-2	40	Glycine max	Gma.5710.1.S1_at	AI442566	-	-	7e-5	At4g08230	glycine-rich protein	C.G.	S.X.	Please select
0.25	3e-24	111	Hordeum vulgare	Contig4804_at	Contig4804	-	-	1e-1	At1g72600	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.19	9e-31	135	Oryza sativa	Os03g0263700	AK071748.1	-	Conserved hypothetical protein	5e+0	At5g06020	self-incompatibility protein-related	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.13	1e-7	57	Populus trichocarpa	PtpAffx.12741.1.A1_at	CV234093	-	-	8e-2	At4g08230	glycine-rich protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.54	4e-90	331	Triticum aestivum	Ta.17270.1.S1_at	CA619221	-	-	1e+0	At2g45420	LBD18 (LOB DOMAIN-CONTAINING PROTEIN 18)	C.G.	S.X.	Please select
0.08	4e-1	34	Vitis vinifera	1619942_at	CF568925	-	-	3e+0	At3g57370	transcription factor IIB (TFIIB) family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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