CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.7620.1.A1_at

Gene name hypothetical protein LOC100279978

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.7620.1.A1_at CF629426 hypothetical protein LOC100279978 - 2e-3 At2g24010 scpl23 (serine carboxypeptidase-like 23) S.X. H.G.
0.67 85.8 Zm.10479.1.S1_at BQ486450 - - 5e+0 At5g13990 ATEXO70C2 (exocyst subunit EXO70 family protein C2) S.X. H.G.
0.55 71.6 Zm.2810.1.S1_at CK371548 calcitonin peptide-receptor component protein - 7e-1 At1g18170 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein S.X. H.G.
0.36 41.3 Zm.218.1.A1_a_at AB016802.1 ABA stimulation MAP kinase - 6e-42 At2g43790 ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6) S.X. H.G.
0.34 37.2 Zm.2016.1.S1_at AW566149 zinc finger, C3HC4 type family protein - 2e+0 At5g51195 unknown protein S.X. H.G.
0.31 31.6 Zm.7941.1.A1_at BM080529 - - 1e+0 At3g50040 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.8 95.5 GSM253277 ZM_8d_SG200_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
3.3 94.7 GSM253278 ZM_8d_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
3.1 94.3 GSM253273 ZM_4.5d_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
3.1 94.3 GSM253279 ZM_8d_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
3.0 94.0 GSM205373 Mo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.9 93.8 GSM253271 ZM_4.5d_SG200_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
2.7 93.2 GSM253272 ZM_4.5d_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
2.6 92.9 GSM205375 Mo17xB73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.5 92.6 GSM205365 Mo17 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.4 92.2 GSM205369 Mo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 4e-3 42 Zm.19021.1.A1_at CO531319 virulence-related protein Nf314 - 9e-7 At2g35780 scpl26 (serine carboxypeptidase-like 26) C.G. S.X.
0.02 2e-1 36 Zm.8389.1.A1_at BM332407 hypothetical protein LOC100278110 - 3e-1 At2g36890 RAX2 (REGULATOR OF AXILLARY MERISTEMS 2) C.G. S.X.
0.02 9e-1 34 ZmAffx.1060.1.A1_at AI881420 - - 1e-9 At1g51570 C2 domain-containing protein C.G. S.X.
0.02 9e-1 34 ZmAffx.1060.1.S1_at AI881420 phosphoribosylanthranilate transferase - 1e-9 At1g51570 C2 domain-containing protein C.G. S.X.
0.02 9e-1 34 ZmAffx.1060.1.S1_s_at AI881420 phosphoribosylanthranilate transferase - 1e-9 At1g51570 C2 domain-containing protein C.G. S.X.
0.02 9e-1 34 Zm.947.1.A1_at BF733123 - - 2e-2 At3g17180 scpl33 (serine carboxypeptidase-like 33) C.G. S.X.
0.02 9e-1 34 Zm.9452.1.A1_at AY106743.1 hypothetical protein LOC100280402 - 2e-3 At5g61880 signaling molecule-related C.G. S.X.
0.02 9e-1 34 Zm.2292.1.S1_at AY106626.1 hypothetical protein LOC100276186 - 4e-1 At5g62950 catalytic/ nucleotide binding C.G. S.X.
0.01 9e-1 34 Zm.1980.1.A1_at CF630017 hypothetical protein LOC100193990 - 2e+0 At4g14410 basic helix-loop-helix (bHLH) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e-3 44 Arabidopsis thaliana At2g24010 816935 scpl23 (serine carboxypeptidase-like 23) F:serine-type carboxypeptidase activity;P:proteolysis;C:unknown;PMFOB - - - C.G. S.X.
0.10 2e-7 57 Glycine max Gma.17972.1.S1_at BG510741 - - 2e+0 At4g15100 scpl30 (serine carboxypeptidase-like 30) C.G. S.X.
0.40 2e-134 478 Hordeum vulgare Contig6674_at Contig6674 - - 7e-20 At4g30810 scpl29 (serine carboxypeptidase-like 29) C.G. S.X.
0.38 2e-150 533 Oryza sativa Os06g0186400 AK066243.1 - Serine carboxypeptidase II-2 precursor (EC3.4.16.6) (CP-MII.2) (Fragment) 2e-14 At4g30810 scpl29 (serine carboxypeptidase-like 29) C.G. S.X.
0.09 5e-11 69 Populus trichocarpa PtpAffx.23326.1.S1_a_at CV258177 hypothetical protein - 9e-29 At4g30810 scpl29 (serine carboxypeptidase-like 29) C.G. S.X.
0.46 1e-94 347 Triticum aestivum Ta.21266.1.A1_x_at CK151635 - - 8e-3 At4g30810 scpl29 (serine carboxypeptidase-like 29) C.G. S.X.
0.08 6e-7 54 Vitis vinifera 1619169_at BQ793912 hypothetical protein LOC100251399 - 3e-20 At2g35780 scpl26 (serine carboxypeptidase-like 26) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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