Gene omics information

Query gene ID	Zm.76.1.A1_at
Gene name	ascorbate peroxidase2
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	85.8	Zm.76.1.A1_at	BG842749	ascorbate peroxidase2	-	3e-27	At1g07890	APX1 (ascorbate peroxidase 1)	S.X.	H.G.	Please select
0.67	85.8	Zm.18405.1.A1_at	CO521227	hypothetical protein LOC100193248	-	3e+0	At5g01881	unknown protein	S.X.	H.G.	Please select
0.63	81.1	Zm.5919.1.S1_at	AI795365	-	-	4e-2	At1g59750	ARF1 (AUXIN RESPONSE FACTOR 1)	S.X.	H.G.	Please select
0.63	81.1	Zm.10135.1.A1_at	BM381166	-	-	1e+0	At5g47550	cysteine protease inhibitor, putative / cystatin, putative	S.X.	H.G.	Please select
0.33	36.0	Zm.5101.1.S1_at	AY110556.1	hypothetical protein LOC100193724	-	1e-3	At3g01300	protein kinase, putative	S.X.	H.G.	Please select
0.26	22.7	Zm.2997.1.S1_at	CD983066	REX1 DNA Repair family protein	-	6e+0	At5g35525	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.2	96.9	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis
4.3	96.1	GSM253281	ZM_8d_SG200_3Alu_II	GSE10023	Maize gene expression during infection with Ustilago maydis
3.8	95.5	GSM253280	ZM_8d_SG200_3Alu_I	GSE10023	Maize gene expression during infection with Ustilago maydis
3.1	94.3	GSM320443	protocol: mRNA - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.0	94.0	GSM202303	Mo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.9	93.8	GSM258175	Mo17 11-day seedling aerial tissue biological replicate 1	GSE10236	Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
2.8	93.5	GSM206317	Right pulvinus control total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.8	93.5	GSM206328	Upper pulvinus 60 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.8	93.5	GSM202297	Mo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.8	93.5	GSM202304	B73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.47	3e-118	424	Zm.3633.7.S1_at	CF048475	APx1 - Cytosolic Ascorbate Peroxidase	-	4e-29	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.30	3e-93	341	Zm.3633.6.S1_at	CF005633	APx1 - Cytosolic Ascorbate Peroxidase	-	5e-29	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.40	1e-89	329	Zm.3633.2.S1_x_at	CF634876	APx1 - Cytosolic Ascorbate Peroxidase	-	3e-28	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.43	1e-83	309	Zm.3633.8.A1_at	AI881249	-	-	7e-29	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.43	1e-83	309	Zm.3633.8.S1_x_at	AI881249	APx1 - Cytosolic Ascorbate Peroxidase	-	7e-29	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.33	1e-46	186	Zm.3633.3.S1_a_at	AW067076	APx1 - Cytosolic Ascorbate Peroxidase /// ascorbate peroxidase	-	6e-12	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.33	1e-46	186	Zm.3633.3.S1_x_at	AW067076	ascorbate peroxidase	-	6e-12	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.04	3e-7	56	Zm.6166.1.A1_a_at	CD996417	hypothetical protein LOC100193965	-	3e-18	At4g35000	APX3 (ASCORBATE PEROXIDASE 3)	C.G.	S.X.	Please select
0.02	4e-3	42	Zm.818.1.A1_at	CK985714	hypothetical protein LOC100194015	-	1e-1	At5g14690	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.17	3e-27	123	Arabidopsis thaliana	At1g07890	837304	APX1 (ascorbate peroxidase 1)	Encodes a cytosolic ascorbate peroxidase APX1. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. At least part of the induction of heat shock proteins during light stress in Arabidopsis is mediated by H2O2 that is scavenged by APX1. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.32	9e-10	65	Glycine max	Gma.13160.1.S1_at	L10292.1	ascorbate peroxidase 1, cytosolic	-	5e-23	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.52	0	688	Hordeum vulgare	Contig1727_s_at	Contig1727	-	-	1e-17	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.50	6e-98	359	Oryza sativa	Os03g0285700	AY254495.1	-	Ascorbate peroxidase (EC 1.11.1.11) (Cytosolicascorbate peroxidase 1)	3e-12	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.37	7e-26	119	Populus trichocarpa	PtpAffx.5471.1.A1_a_at	CV252337	hypothetical protein	-	3e-15	At3g09640	APX2 (ASCORBATE PEROXIDASE 2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.39	6e-84	311	Triticum aestivum	Ta.23079.1.S1_a_at	BJ317746	-	-	2e-13	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.43	2e-44	178	Vitis vinifera	1606498_s_at	CF214775	ascorbate peroxidase	-	7e-22	At3g09640	APX2 (ASCORBATE PEROXIDASE 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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