Gene omics information

Query gene ID	Zm.7576.1.A1_at
Gene name	hypothetical protein LOC100280037
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.7576.1.A1_at	BM332934	hypothetical protein LOC100280037	-	2e+1	At5g56150	UBC30 (ubiquitin-conjugating enzyme 30)	S.X.	H.G.	Please select
0.18	11.6	Zm.4998.1.A1_at	AI600277	acetyltransferase, GNAT family protein	-	3e+0	At1g19910	AVA-P2	S.X.	H.G.	Please select
0.10	4.6	Zm.13302.1.S1_at	CA827293	-	-	3e+0	At4g17785	MYB39 (myb domain protein 39)	S.X.	H.G.	Please select
0.04	1.5	Zm.17747.1.S1_at	CK370981	hypothetical protein LOC100193554	-	1e+0	At2g29390	SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2)	S.X.	H.G.	Please select
0.03	1.1	Zm.17194.1.A1_at	BM380168	-	-	1e-3	At5g44450	methyltransferase	S.X.	H.G.	Please select
0.03	1.1	Zm.17595.1.A1_a_at	CF019038	-	-	4e-18	At1g04870	PRMT10	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.2	98.0	GSM258531	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 1	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
8.0	98.0	GSM258532	DpDf siblings in family segregating for T5-6b DpDf plants; Biological replicate 1	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
6.9	97.7	GSM258533	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 2	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
6.9	97.7	GSM258537	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 4	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
6.5	97.5	GSM258536	DpDf siblings in family segregating for T5-6b DpDf plants; Biological replicate 3	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
6.5	97.5	GSM258535	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 3	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
6.3	97.4	GSM258534	DpDf siblings in family segregating for T5-6b DpDf plants; Biological replicate 2	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
6.0	97.3	GSM290554	WS2 with array type maize from Affymetrix	GSE11531	Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
5.8	97.2	GSM258538	DpDf siblings in family segregating for T5-6b DpDf plants; Biological replicate 4	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
4.9	96.7	GSM290555	CCR mutant M1 with array type maize from Affymetrix	GSE11531	Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.26	1e-26	119	Zm.19294.1.A1_at	CO519402	hypothetical protein LOC100217152	-	3e-1	At5g33370	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select
0.16	4e-11	67	Zm.17169.1.S1_at	CO532055	hypothetical protein LOC100280267	-	3e-3	At4g28780	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select
0.03	2e-3	42	Zm.6459.1.S1_at	CF647279	hypothetical protein LOC100274304	-	2e-1	At4g11430	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.02	2e-3	42	Zm.17181.1.S1_at	CK145306	-	-	7e-17	At1g64660	ATMGL (ARABIDOPSIS THALIANA METHIONINE GAMMA-LYASE)	C.G.	S.X.	Please select
0.02	8e-3	40	Zm.6768.1.S1_at	AI396277	anther-specific proline-rich protein APG	-	2e-4	At1g29670	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select
0.02	3e-2	38	Zm.394.1.S1_at	U95180.1	hypothetical protein LOC100193093	-	2e-1	At1g23340	unknown protein	C.G.	S.X.	Please select
0.02	1e-1	36	Zm.8215.1.A1_at	CO532014	anther-specific proline-rich protein APG	-	8e-4	At4g30140	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select
0.03	1e-1	36	Zm.6455.1.A1_at	AI619337	-	-	3e-17	At3g63280	ATNEK4 (NIMA-RELATED KINASE 4)	C.G.	S.X.	Please select
0.03	1e-1	36	Zm.19201.2.A1_at	CO526388	Hypothetical protein LOC100216991	-	2e+0	At5g39650	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e+1	30	Arabidopsis thaliana	At5g56150	835714	UBC30 (ubiquitin-conjugating enzyme 30)	F:ubiquitin-protein ligase activity;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;MFOPV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e+0	34	Glycine max	PsAffx.psHA011iB06r_s_at	PsAffx.psHA011iB06r	-	-	8e+0	At5g67450	AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1)	C.G.	S.X.	Please select
0.21	7e-16	83	Hordeum vulgare	Contig17468_at	Contig17468	-	-	2e+0	At4g22570	APT3 (ADENINE PHOSPHORIBOSYL TRANSFERASE 3)	C.G.	S.X.	Please select
0.20	2e-65	250	Oryza sativa	Os02g0816200	AK060243.1	-	Lipolytic enzyme, G-D-S-L family protein	2e-4	At3g04290	LTL1 (LI-TOLERANT LIPASE 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.07	2e+0	34	Populus trichocarpa	PtpAffx.16291.1.A1_at	DN491820	hypothetical protein	-	1e-3	At3g04290	LTL1 (LI-TOLERANT LIPASE 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.35	3e-63	242	Triticum aestivum	Ta.18076.2.S1_x_at	CA631513	-	-	1e+0	At4g32340	-	C.G.	S.X.	Please select
0.03	1e+0	32	Vitis vinifera	1613673_at	CF215004	hypothetical protein LOC100255721	-	3e-10	At5g09620	octicosapeptide/Phox/Bem1p (PB1) domain-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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