Gene omics information

Query gene ID Zm.749.1.S1_at
Gene name photosystem II subunit PsbS1
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.749.1.S1_atAY291061.1photosystem II subunit PsbS1-8e-7At1g44575NPQ4 (NONPHOTOCHEMICAL QUENCHING)S.X.H.G.
0.7389.9Zm.17497.1.A1_atBG266429hypothetical protein LOC100273930-3e+0Atmg00140-S.X.H.G.
0.6785.8Zm.6049.1.A1_atAY103705.1--1e-1At5g02400PLL2S.X.H.G.
0.5674.4Zm.6049.3.A1_a_atAI734480phosphatidylinositol transporter/ transporter-3e-3At1g76640calmodulin-related protein, putativeS.X.H.G.
0.4455.7Zm.6045.2.A1_a_atBM337093guanine nucleotide-binding protein beta subunit-like protein-2e-10At1g18080ATARCAS.X.H.G.
0.3131.6Zm.18416.1.A1_atCO524449hypothetical protein LOC100193203-3e-1At3g27900unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.494.9GSM253268ZM_4.5d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
3.494.9GSM253270ZM_4.5d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
3.394.7GSM258176Oh43 11-day seedling aerial tissue biological replicate 1GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
3.394.7GSM258178B84xB73 11-day seedling aerial tissue biological replicate 1GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
3.294.5GSM258201Wf9 11-day seedling aerial tissue biological replicate 1GSE10237Gene expression variation among eight maize inbreds
3.294.5GSM253264ZM_4d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
3.194.3GSM253269ZM_4.5d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
3.194.3GSM253257ZM_2d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
3.194.3GSM258172B37 11-day seedling aerial tissue biological replicate 1GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
3.194.3GSM253258ZM_2d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-859Zm.8968.1.S1_atCA404069Hypothetical protein LOC100191639-4e-2At1g28140unknown proteinC.G.S.X.
0.018e-238Zm.6262.1.A1_atAY104073.1--1e-2At5g12970C2 domain-containing proteinC.G.S.X.
0.013e-136Zm.9958.1.A1_atBM333322--6e-2At3g01320SNL1 (SIN3-LIKE 1)C.G.S.X.
0.013e-136Zm.509.1.S1_atAF096871.1calcium pump1-3e-11At1g07810ECA1 (ER-TYPE CA2+-ATPASE 1)C.G.S.X.
0.013e-136Zm.4704.1.A1_atAI737319DNA repair protein RAD23-5e-8At5g38470DNA repair protein RAD23, putativeC.G.S.X.
0.013e-136Zm.17673.1.A1_atCK369778hypothetical protein LOC100272312-1e-1At1g20340DRT112C.G.S.X.
0.023e-136Zm.17560.1.A1_atCF626464hypothetical protein LOC100277164-1e-3At1g08340rac GTPase activating protein, putativeC.G.S.X.
0.013e-136Zm.15411.1.A1_atCA399900--4e-3At1g76990ACR3C.G.S.X.
0.021e+034Zm.6905.1.A1_a_atAF461814.1histone1a-6e-1At4g04620ATG8B (autophagy 8b)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.068e-756Arabidopsis thalianaAt1g44575841033NPQ4 (NONPHOTOCHEMICAL QUENCHING)Encoding PSII-S (CP22), a ubiquitous pigment-binding protein associated with photosystem II (PSII) of higher plants. Involved in nonphotochemical quenching rather than in photosynthesis. Mutant has a normal violaxanthin cycle but has a limited capacity of quenching singlet excited chlorophylls and is tolerant to lipid peroxidation.---C.G.S.X.
0.097e-550Glycine maxGma.14976.1.A1_atCD404795--2e-7At1g44575NPQ4 (NONPHOTOCHEMICAL QUENCHING)C.G.S.X.
0.470694Hordeum vulgareContig1916_s_atContig1916--2e-2At1g44575NPQ4 (NONPHOTOCHEMICAL QUENCHING)C.G.S.X.
0.363e-165583Oryza sativaOs01g0869800AK058284.1-Photosystem II subunit PsbS4e-8At1g44575NPQ4 (NONPHOTOCHEMICAL QUENCHING)C.G.S.X.
0.181e-1275Populus trichocarpaPtp.5247.1.S1_atCV278066hypothetical protein-3e-21At1g44575NPQ4 (NONPHOTOCHEMICAL QUENCHING)C.G.S.X.
0.440710Triticum aestivumTa.1161.1.S1_atBJ261576--4e-2At2g17240unknown proteinC.G.S.X.
0.173e-25115Vitis vinifera1611582_s_atCB970190hypothetical protein LOC100245393-5e-5At1g44575NPQ4 (NONPHOTOCHEMICAL QUENCHING)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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