Gene omics information

Query gene ID	Zm.7369.1.A1_at
Gene name	integral membrane protein like
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.61	79.5	Zm.7369.1.A1_at	CD976747	integral membrane protein like	-	6e-3	At1g34020	transporter-related	S.X.	H.G.	Please select
0.84	95.8	Zm.19299.1.A1_at	BM074654	-	-	4e-3	At4g09270	unknown protein	S.X.	H.G.	Please select
0.81	94.3	Zm.13523.1.A1_at	AY108425.1	-	-	6e-1	At5g59470	PQ-loop repeat family protein / transmembrane family protein	S.X.	H.G.	Please select
0.80	94.0	Zm.8110.1.A1_at	CF623866	hypothetical protein LOC100278802	-	3e-25	At5g49820	emb1879 (embryo defective 1879)	S.X.	H.G.	Please select
0.76	91.1	ZmAffx.225.1.S1_at	AI670237	-	-	1e+1	At5g09470	mitochondrial substrate carrier family protein	S.X.	H.G.	Please select
0.76	91.1	Zm.18525.1.A1_at	CO530497	-	-	1e-4	At5g28150	unknown protein	S.X.	H.G.	Please select
0.71	88.2	Zm.6306.2.A1_at	AI691326	Protein kinase catalytic domain	-	1e-10	At1g35670	ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2)	S.X.	H.G.	Please select
0.67	85.8	Zm.5989.1.A1_at	AI666066	-	-	3e-1	At4g24960	ATHVA22D	S.X.	H.G.	Please select
0.62	79.8	Zm.13494.1.A1_at	AY108782.1	-	-	4e-1	At2g17300	unknown protein	S.X.	H.G.	Please select
0.59	76.1	Zm.6977.5.A1_at	AI881652	Sucrose synthase	-	1e-11	At5g20830	SUS1 (SUCROSE SYNTHASE 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
15.0	98.9	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.1	98.5	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.1	98.5	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.5	98.4	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.3	98.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.1	98.4	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.2	98.0	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.5	97.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.8	97.6	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.6	92.9	GSM206325	Upper pulvinus 5 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.13	1e-14	79	Zm.3959.1.A1_at	AY109274.1	hypothetical protein LOC100193090	-	4e-21	At1g34020	transporter-related	C.G.	S.X.	Please select
0.06	7e-10	63	Zm.18061.1.A1_at	CK985852	-	-	1e+0	At1g30795	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.08	3e-9	61	Zm.3959.2.A1_at	AY110235.1	integral membrane protein like	-	1e-20	At1g34020	transporter-related	C.G.	S.X.	Please select
0.08	3e-9	61	Zm.3959.2.A1_a_at	AY110235.1	hypothetical protein LOC100193090 /// hypothetical protein LOC100216942 /// integral membrane protein like	-	1e-20	At1g34020	transporter-related	C.G.	S.X.	Please select
0.05	6e-4	44	Zm.18418.1.S1_at	CO533004	-	-	2e-7	At1g76670	transporter-related	C.G.	S.X.	Please select
0.01	2e+0	32	Zm.6884.1.S1_at	AI065628	ribose-phosphate pyrophosphokinase 4	-	3e-9	At2g42910	ribose-phosphate pyrophosphokinase 4 / phosphoribosyl diphosphate synthetase 4 (PRS4)	C.G.	S.X.	Please select
0.01	2e+0	32	Zm.4846.1.A1_at	BQ538226	cyclin B2	-	3e-7	At1g76310	CYCB2	C.G.	S.X.	Please select
0.01	2e+0	32	Zm.4264.1.S1_at	CA400096	hypothetical protein LOC100193823 /// hypothetical protein LOC100274195 /// non-green plastid inner envelope membrane protein	-	4e+0	At3g62790	NADH-ubiquinone oxidoreductase-related	C.G.	S.X.	Please select
0.02	2e+0	32	Zm.10803.1.S1_at	BQ577732	desiccation-associated protein	-	4e-5	At4g04900	RIC10 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 10)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.11	6e-3	42	Arabidopsis thaliana	At1g34020	840299	transporter-related	F:unknown;P:unknown;C:plasma membrane, membrane;PMFOB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.08	2e+0	34	Glycine max	Gma.8846.2.S1_at	BM107812	-	-	6e-15	At5g42420	transporter-related	C.G.	S.X.	Please select
0.32	4e-67	254	Hordeum vulgare	Contig14225_at	Contig14225	-	-	2e+0	At1g34020	transporter-related	C.G.	S.X.	Please select
0.25	5e-82	305	Oryza sativa	Os12g0154600	AK060206.1	-	Conserved hypothetical protein	7e-20	At4g09810	transporter-related	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	5e-1	36	Populus trichocarpa	PtpAffx.205623.1.S1_at	pmrna11113	hypothetical protein	-	2e-81	At4g09810	transporter-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.22	2e-70	266	Triticum aestivum	Ta.24952.1.S1_at	CK167028	-	-	4e-9	At4g09810	transporter-related	C.G.	S.X.	Please select
0.07	4e-1	34	Vitis vinifera	1618962_at	BQ798116	hypothetical protein LOC100257791	-	7e-21	At1g34020	transporter-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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