CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.7167.1.A1_at

Gene name membrane protein

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 81.1 Zm.7167.1.A1_at BU050804 membrane protein - 4e-7 At1g27350 - S.X. H.G.
0.77 92.1 Zm.10263.1.S1_at AF351190.1 D-type cyclin - 9e-1 At2g36260 iron-sulfur cluster assembly complex protein, putative S.X. H.G.
0.59 76.1 Zm.10264.1.S1_at BU049716 - - 9e-1 At3g22530 unknown protein S.X. H.G.
0.58 75.1 Zm.17443.1.A1_at CK347379 - - 5e+0 At4g14100 transferase, transferring glycosyl groups S.X. H.G.
0.43 52.8 Zm.17174.1.A1_at CO531239 hypothetical protein LOC100273979 - 2e-6 At1g24400 LHT2 (LYSINE HISTIDINE TRANSPORTER 2) S.X. H.G.
0.32 33.4 Zm.9717.1.A1_at BM336547 hypothetical protein LOC100192773 - 9e-5 At2g47490 mitochondrial substrate carrier family protein S.X. H.G.
0.25 21.3 Zm.5012.1.A1_at CK849978 auxin response factor 75 - 9e-1 At3g45050 unknown protein S.X. H.G.
0.14 7.7 Zm.17923.1.A1_at AY110526.1 hypothetical protein LOC100276264 - 1e-1 At2g44840 ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.6 97.6 GSM162264 Mutant 2 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
5.9 97.3 GSM205433 B73 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
5.1 96.8 GSM205429 B73xMo17 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
5.1 96.8 GSM205434 Mo17xB73 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
5.0 96.7 GSM205436 B73xMo17 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
4.7 96.5 GSM205431 Mo17 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
4.0 95.8 GSM206297 Lower pulvinus 30 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.0 95.8 GSM205424 Mo17 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
4.0 95.8 GSM205425 B73 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
4.0 95.8 GSM205422 Mo17xB73 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.26 2e-50 198 Zm.3955.1.A1_at CF015847 - - 5e-3 At1g27330 - C.G. S.X.
0.30 2e-31 135 Zm.1776.1.S1_at BM382204 - - 2e-11 At1g27330 - C.G. S.X.
0.10 2e-1 36 Zm.11185.1.S1_at CF349219 hypothetical protein LOC100272632 - 3e-14 At1g27350 - C.G. S.X.
0.10 6e-1 34 Zm.13830.1.S1_at AY104368.1 membrane protein - 3e-14 At1g27350 - C.G. S.X.
0.03 2e+0 32 ZmAffx.1199.2.A1_at AI691435 - - 1e-8 At3g48610 phosphoesterase family protein C.G. S.X.
0.03 2e+0 32 ZmAffx.1199.2.S1_at AI691435 hydrolase, acting on ester bonds - 5e-5 At1g07230 hydrolase, acting on ester bonds C.G. S.X.
0.02 2e+0 32 Zm.1769.1.S1_at BF728598 hypothetical protein LOC100276417 - 4e-1 At5g63480 unknown protein C.G. S.X.
0.02 2e+0 32 Zm.17213.1.A1_at CK367919 - - 2e+0 At1g75520 SRS5 (SHI-RELATED SEQUENCE 5) C.G. S.X.
0.03 9e+0 30 Zm.8582.1.A1_at BM333994 - - 1e+0 At3g59280 TXR1 (THAXTOMIN A RESISTANT 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 4e-7 56 Arabidopsis thaliana At1g27350 839624 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPO - - - C.G. S.X.
0.11 9e-9 61 Glycine max Gma.17908.1.S1_s_at CD393355 - - 2e-30 At1g27330 - C.G. S.X.
0.30 3e-49 194 Hordeum vulgare Contig4714_s_at Contig4714 - - 9e-1 At3g28940 avirulence-responsive protein, putative / avirulence induced gene (AIG) protein, putative C.G. S.X.
0.29 9e-62 238 Oryza sativa Os11g0637400 BI799785 - Sorbitol transporter 2e-8 At1g27350 - C.G. S.X.
0.11 9e-9 61 Populus trichocarpa PtpAffx.5472.2.S1_a_at CV232379 hypothetical protein - 7e-9 At1g27330 - C.G. S.X.
0.53 8e-98 357 Triticum aestivum Ta.20614.1.S1_at CA486947 - - 4e-3 At1g27330 - C.G. S.X.
0.22 2e-33 141 Vitis vinifera 1622224_at CB917502 hypothetical protein LOC100241985 - 5e-15 At1g27350 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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