Gene omics information

Query gene ID	Zm.7152.1.A1_at
Gene name	hypothetical protein LOC100216962
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.48	61.3	Zm.7152.1.A1_at	AY110483.1	hypothetical protein LOC100216962	-	7e-5	At5g47500	pectinesterase family protein	S.X.	H.G.	Please select
0.77	92.1	Zm.12836.1.S1_at	CA400077	MPPN domain containing protein	-	2e+0	At2g21220	auxin-responsive protein, putative	S.X.	H.G.	Please select
0.71	88.2	Zm.17902.1.A1_at	CK786798	-	-	3e+0	At5g65350	histone H3	S.X.	H.G.	Please select
0.67	85.8	Zm.5018.2.S1_at	AY112461.1	Hypothetical protein LOC100194303	-	4e-1	At5g49350	unknown protein	S.X.	H.G.	Please select
0.61	79.5	Zm.5018.3.A1_at	AI668145	-	-	9e-1	At5g48920	TED7 (TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7)	S.X.	H.G.	Please select
0.61	79.5	Zm.17636.1.A1_at	CK368463	-	-	1e+0	At5g34882	-	S.X.	H.G.	Please select
0.53	69.1	Zm.4024.1.A1_at	AY105692.1	-	-	1e-3	At2g35170	MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
22.8	99.5	GSM202314	Mo17 19 day after pollination embryo tissue, biological replicate 2	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
22.5	99.5	GSM202319	Mo17 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
20.8	99.4	GSM202313	B73xMo17 19 day after pollination embryo tissue, biological replicate 1	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
20.6	99.3	GSM202309	Mo17 19 day after pollination embryo tissue, biological replicate 1	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
17.4	99.1	GSM202318	B73xMo17 19 day after pollination embryo tissue, biological replicate 2	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
15.7	99.0	GSM202311	Mo17xB73 19 day after pollination embryo tissue, biological replicate 1	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
13.1	98.7	GSM202310	B73 19 day after pollination embryo tissue, biological replicate 1	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
13.1	98.7	GSM202322	B73x Mo17 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
12.0	98.6	GSM202316	Mo17xB73 19 day after pollination embryo tissue, biological replicate 2	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
11.9	98.6	GSM202324	Mo17xB73 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	5e-4	46	Zm.14962.1.A1_at	BM268018	hypothetical protein LOC100280285	-	2e-1	At3g59010	pectinesterase family protein	C.G.	S.X.	Please select
0.01	1e-1	38	Zm.3885.1.S1_at	CK145224	Pectin methylesterase1	-	6e-2	At3g06830	pectinesterase family protein	C.G.	S.X.	Please select
0.03	1e-1	38	Zm.1975.1.S1_at	BF729513	pectinesterase-1	-	7e-3	At3g05610	pectinesterase family protein	C.G.	S.X.	Please select
0.01	1e-1	38	Zm.13316.1.S1_at	CA827638	hypothetical protein LOC100277642	-	5e-1	At3g59640	glycine-rich protein	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.3396.1.S1_at	AY107588.1	mtN19-like protein	-	2e+1	At5g51830	pfkB-type carbohydrate kinase family protein	C.G.	S.X.	Please select
0.02	4e-1	36	Zm.16593.2.S1_at	CK371439	signal peptidase complex subunit 3	-	9e-18	At3g05230	signal peptidase subunit family protein	C.G.	S.X.	Please select
0.02	4e-1	36	Zm.16593.2.S1_a_at	CK371439	signal peptidase complex subunit 3	-	9e-18	At3g05230	signal peptidase subunit family protein	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.1588.1.S1_at	AY344632.1	beta-glucanase	-	5e-9	At3g47050	glycosyl hydrolase family 3 protein	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.12637.1.S1_at	BU097456	hypothetical protein LOC100280172	-	8e-7	At3g21360	electron carrier/ oxidoreductase	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.08	7e-5	50	Arabidopsis thaliana	At5g47500	834800	pectinesterase family protein	F:pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.11	4e-10	67	Glycine max	Gma.13597.1.A1_at	CD401381	-	-	2e-37	At5g47500	pectinesterase family protein	C.G.	S.X.	Please select
0.20	2e-105	383	Hordeum vulgare	HX03C24u_at	HX03C24u	-	-	1e-2	At5g47500	pectinesterase family protein	C.G.	S.X.	Please select
0.35	0	888	Oryza sativa	Os04g0553500	AK067182.1	-	Pectinesterase family protein	5e-17	At5g47500	pectinesterase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	6e-3	44	Populus trichocarpa	PtpAffx.90817.1.A1_at	CK090489	hypothetical protein	-	4e-26	At5g47500	pectinesterase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.30	3e-121	436	Triticum aestivum	TaAffx.36894.2.S1_at	BJ303490	-	-	2e-2	At5g47500	pectinesterase family protein	C.G.	S.X.	Please select
0.01	5e-3	42	Vitis vinifera	1610996_at	BQ794786	pectinesterase	-	2e-9	At1g53840	ATPME1	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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