Gene omics information

Query gene ID	Zm.7097.2.A1_a_at
Gene name	hypothetical protein LOC100273341 /// 40S ribosomal protein S18
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.7097.2.A1_a_at	CF019338	hypothetical protein LOC100273341 /// 40S ribosomal protein S18	-	2e-27	At1g22780	PFL (POINTED FIRST LEAVES)	S.X.	H.G.	Please select
0.91	99.0	Zm.7096.1.A1_at	BM338621	eukaryotic translation initiation factor 6	-	1e-29	At3g55620	emb1624 (embryo defective 1624)	S.X.	H.G.	Please select
0.83	95.6	Zm.7097.1.S1_at	BQ279744	hypothetical protein LOC100273341	-	4e-29	At1g22780	PFL (POINTED FIRST LEAVES)	S.X.	H.G.	Please select
0.67	85.8	Zm.5721.1.S1_at	AI637090	hypothetical protein LOC100191423	-	9e-2	At4g12460	ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B)	S.X.	H.G.	Please select
0.46	58.4	Zm.17766.1.S1_at	CK371550	-	-	3e+0	At5g14730	unknown protein	S.X.	H.G.	Please select
0.35	38.9	Zm.9760.1.A1_at	BM335574	hypothetical protein LOC100278683	-	1e+0	At5g67060	HEC1 (HECATE 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.2	94.5	GSM205429	B73xMo17 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
3.0	94.0	GSM205372	B73xMo17 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.0	94.0	GSM205375	Mo17xB73 13 DAP endosperm tissue biological replicate 3	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.0	94.0	GSM205368	B73xMo17 13 DAP endosperm tissue biological replicate 1	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.8	93.5	GSM205427	Mo17xB73 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
2.7	93.2	GSM205425	B73 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
2.7	93.2	GSM205376	B73xMo17 13 DAP endosperm tissue biological replicate 3	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.6	92.9	GSM205366	B73 13 DAP endosperm tissue biological replicate 1	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.6	92.9	GSM205433	B73 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
2.6	92.9	GSM205423	B73xMo17 19 DAP endosperm tissue biological replicate 1	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.94	0	1408	Zm.7097.2.A1_x_at	CF019338	40S ribosomal protein S18	-	2e-27	At1g22780	PFL (POINTED FIRST LEAVES)	C.G.	S.X.	Please select
0.64	0	783	Zm.7097.1.S1_at	BQ279744	hypothetical protein LOC100273341	-	4e-29	At1g22780	PFL (POINTED FIRST LEAVES)	C.G.	S.X.	Please select
0.02	7e-1	34	Zm.7409.1.A1_at	CF042542	hypothetical protein LOC100191559	-	2e-1	At4g15790	unknown protein	C.G.	S.X.	Please select
0.02	7e-1	34	Zm.7008.1.A1_at	AY106262.1	xyloglucan endotransglycosylase/hydrolase protein 8	-	7e-1	At1g18210	calcium-binding protein, putative	C.G.	S.X.	Please select
0.02	7e-1	34	Zm.7008.1.A1_s_at	AY106262.1	xyloglucan endotransglycosylase/hydrolase protein 8	-	7e-1	At1g18210	calcium-binding protein, putative	C.G.	S.X.	Please select
0.02	7e-1	34	Zm.5637.1.A1_at	BM079527	hypothetical protein LOC100217032	-	3e+0	At3g50250	unknown protein	C.G.	S.X.	Please select
0.02	7e-1	34	Zm.3393.1.A1_at	CF634160	-	-	1e+0	At5g15530	BCCP2 (BIOTIN CARBOXYL CARRIER PROTEIN 2)	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.8811.1.A1_at	BM332730	protein binding protein	-	7e+0	At2g20515	unknown protein	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.7612.1.A1_at	BM079194	hypothetical protein LOC100274866	-	7e-3	At4g17670	senescence-associated protein-related	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.51	2e-27	123	Arabidopsis thaliana	At1g22780	838884	PFL (POINTED FIRST LEAVES)	S18 ribosomal protein involved in the binding of f-Met tRNA during initiation of mRNA translation. Expression restricted to meristems. Mutant phenotype-pointed first leaves,reduced fresh weight, growth retardation.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.45	4e-51	202	Glycine max	Gma.4208.2.S1_at	CD401340	-	-	2e-34	At1g22780	PFL (POINTED FIRST LEAVES)	C.G.	S.X.	Please select
0.56	2e-152	537	Hordeum vulgare	Contig1342_at	Contig1342	-	-	8e-21	At1g22780	PFL (POINTED FIRST LEAVES)	C.G.	S.X.	Please select
0.53	8e-149	527	Oryza sativa	Os07g0173700	BM418791	-	40S ribosomal protein S18	4e-41	At1g34030	40S ribosomal protein S18 (RPS18B)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.44	1e-51	204	Populus trichocarpa	Ptp.2101.1.S1_at	CK320889	hypothetical protein	-	2e-95	At4g09800	RPS18C (S18 RIBOSOMAL PROTEIN)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.63	1e-139	496	Triticum aestivum	TaAffx.87933.1.S1_at	CA618400	-	-	4e-3	At1g22780	PFL (POINTED FIRST LEAVES)	C.G.	S.X.	Please select
0.42	1e-47	188	Vitis vinifera	1606692_at	CD799030	hypothetical protein LOC100254425	-	2e-86	At1g34030	40S ribosomal protein S18 (RPS18B)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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