Gene omics information

Query gene ID	Zm.7097.1.S1_at
Gene name	hypothetical protein LOC100273341
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.7097.1.S1_at	BQ279744	hypothetical protein LOC100273341	-	4e-29	At1g22780	PFL (POINTED FIRST LEAVES)	S.X.	H.G.	Please select
0.83	95.6	Zm.7097.2.A1_a_at	CF019338	hypothetical protein LOC100273341 /// 40S ribosomal protein S18	-	2e-27	At1g22780	PFL (POINTED FIRST LEAVES)	S.X.	H.G.	Please select
0.83	95.6	Zm.7096.1.A1_at	BM338621	eukaryotic translation initiation factor 6	-	1e-29	At3g55620	emb1624 (embryo defective 1624)	S.X.	H.G.	Please select
0.67	85.8	Zm.5721.1.S1_at	AI637090	hypothetical protein LOC100191423	-	9e-2	At4g12460	ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B)	S.X.	H.G.	Please select
0.61	79.5	Zm.17766.1.S1_at	CK371550	-	-	3e+0	At5g14730	unknown protein	S.X.	H.G.	Please select
0.50	65.7	Zm.1842.1.A1_at	BM074396	hypothetical protein LOC100193349	-	1e-1	At5g23680	sterile alpha motif (SAM) domain-containing protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.0	94.0	GSM205372	B73xMo17 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.0	94.0	GSM205368	B73xMo17 13 DAP endosperm tissue biological replicate 1	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.7	93.2	GSM205429	B73xMo17 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
2.7	93.2	GSM205433	B73 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
2.6	92.9	GSM205375	Mo17xB73 13 DAP endosperm tissue biological replicate 3	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.6	92.9	GSM205374	B73 13 DAP endosperm tissue biological replicate 3	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.5	92.6	GSM205371	Mo17xB73 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.5	92.6	GSM205369	Mo17 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.5	92.6	GSM258532	DpDf siblings in family segregating for T5-6b DpDf plants; Biological replicate 1	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
2.5	92.6	GSM205367	Mo17xB73 13 DAP endosperm tissue biological replicate 1	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.64	0	783	Zm.7097.2.A1_a_at	CF019338	hypothetical protein LOC100273341 /// 40S ribosomal protein S18	-	2e-27	At1g22780	PFL (POINTED FIRST LEAVES)	C.G.	S.X.	Please select
0.64	0	783	Zm.7097.2.A1_x_at	CF019338	40S ribosomal protein S18	-	2e-27	At1g22780	PFL (POINTED FIRST LEAVES)	C.G.	S.X.	Please select
0.04	1e-2	40	ZmAffx.583.1.A1_at	AI714946	ubiquitin-like protein SMT3	-	3e+0	At3g21338	unknown protein	C.G.	S.X.	Please select
0.04	1e-2	40	ZmAffx.583.1.S1_at	AI714946	-	-	3e+0	At3g21338	unknown protein	C.G.	S.X.	Please select
0.03	1e-2	40	Zm.13225.1.S1_at	CD991161	hypothetical protein LOC100276409 /// ubiquitin-like protein SMT3 /// ubiquitin-like protein SMT3	-	6e-25	At4g26840	SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1)	C.G.	S.X.	Please select
0.03	1e-2	40	Zm.13225.1.S1_s_at	CD991161	ubiquitin-like protein SMT3 /// ubiquitin-like protein SMT3	-	6e-25	At4g26840	SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1)	C.G.	S.X.	Please select
0.01	5e-2	38	Zm.3992.1.S1_at	BG841673	hypothetical protein LOC100280384	-	6e-2	At2g45140	PVA12 (PLANT VAP HOMOLOG 12)	C.G.	S.X.	Please select
0.01	8e-1	34	Zm.7008.1.A1_at	AY106262.1	xyloglucan endotransglycosylase/hydrolase protein 8	-	7e-1	At1g18210	calcium-binding protein, putative	C.G.	S.X.	Please select
0.01	8e-1	34	Zm.7008.1.A1_s_at	AY106262.1	xyloglucan endotransglycosylase/hydrolase protein 8	-	7e-1	At1g18210	calcium-binding protein, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.50	4e-29	129	Arabidopsis thaliana	At1g22780	838884	PFL (POINTED FIRST LEAVES)	S18 ribosomal protein involved in the binding of f-Met tRNA during initiation of mRNA translation. Expression restricted to meristems. Mutant phenotype-pointed first leaves,reduced fresh weight, growth retardation.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.41	4e-48	192	Glycine max	Gma.4208.2.S1_at	CD401340	-	-	2e-34	At1g22780	PFL (POINTED FIRST LEAVES)	C.G.	S.X.	Please select
0.50	1e-157	555	Hordeum vulgare	Contig1342_at	Contig1342	-	-	8e-21	At1g22780	PFL (POINTED FIRST LEAVES)	C.G.	S.X.	Please select
0.49	9e-149	527	Oryza sativa	Os07g0173700	BM418791	-	40S ribosomal protein S18	4e-41	At1g34030	40S ribosomal protein S18 (RPS18B)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.33	1e-35	151	Populus trichocarpa	Ptp.2101.1.S1_at	CK320889	hypothetical protein	-	2e-95	At4g09800	RPS18C (S18 RIBOSOMAL PROTEIN)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.60	0	646	Triticum aestivum	TaAffx.87933.1.S1_at	CA618400	-	-	4e-3	At1g22780	PFL (POINTED FIRST LEAVES)	C.G.	S.X.	Please select
0.40	1e-35	149	Vitis vinifera	1606692_at	CD799030	hypothetical protein LOC100254425	-	2e-86	At1g34030	40S ribosomal protein S18 (RPS18B)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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