CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.7096.1.A1_at

Gene name eukaryotic translation initiation factor 6

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.7096.1.A1_at BM338621 eukaryotic translation initiation factor 6 - 1e-29 At3g55620 emb1624 (embryo defective 1624) S.X. H.G.
0.91 99.0 Zm.7097.2.A1_a_at CF019338 hypothetical protein LOC100273341 /// 40S ribosomal protein S18 - 2e-27 At1g22780 PFL (POINTED FIRST LEAVES) S.X. H.G.
0.83 95.6 Zm.7097.1.S1_at BQ279744 hypothetical protein LOC100273341 - 4e-29 At1g22780 PFL (POINTED FIRST LEAVES) S.X. H.G.
0.67 85.8 Zm.5721.1.S1_at AI637090 hypothetical protein LOC100191423 - 9e-2 At4g12460 ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B) S.X. H.G.
0.46 58.4 Zm.17766.1.S1_at CK371550 - - 3e+0 At5g14730 unknown protein S.X. H.G.
0.35 38.9 Zm.9760.1.A1_at BM335574 hypothetical protein LOC100278683 - 1e+0 At5g67060 HEC1 (HECATE 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.7 95.4 GSM253280 ZM_8d_SG200_3Alu_I GSE10023 Maize gene expression during infection with Ustilago maydis
3.4 94.9 GSM205375 Mo17xB73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.4 94.9 GSM253281 ZM_8d_SG200_3Alu_II GSE10023 Maize gene expression during infection with Ustilago maydis
3.3 94.7 GSM205374 B73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.2 94.5 GSM205373 Mo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.2 94.5 GSM205376 B73xMo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.2 94.5 GSM205371 Mo17xB73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.1 94.3 GSM205429 B73xMo17 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
3.0 94.0 GSM205367 Mo17xB73 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.0 94.0 GSM253282 ZM_8d_SG200_3Alu_III GSE10023 Maize gene expression during infection with Ustilago maydis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e-5 50 ZmAffx.1209.1.A1_at BG349642 - - 1e+0 At3g49780 ATPSK4 (PHYTOSULFOKINE 4 PRECURSOR) C.G. S.X.
0.03 2e-5 50 ZmAffx.1209.1.S1_at BG349642 - - 1e+0 At3g49780 ATPSK4 (PHYTOSULFOKINE 4 PRECURSOR) C.G. S.X.
0.03 2e-5 50 Zm.8292.1.S1_at AY106611.1 hypothetical protein LOC100275334 - 6e-15 At4g16450 unknown protein C.G. S.X.
0.03 2e-5 50 Zm.6680.1.A1_at BM073903 hypothetical protein LOC100276152 - 5e+0 At3g18430 calcium-binding EF hand family protein C.G. S.X.
0.01 2e-5 50 Zm.5867.1.A1_at AY103673.1 hypothetical protein LOC100191614 - 5e-89 At3g52990 pyruvate kinase, putative C.G. S.X.
0.02 2e-5 50 Zm.5742.1.A1_at AY104651.1 hypothetical protein LOC100191909 - 8e+0 At3g62070 unknown protein C.G. S.X.
0.02 2e-5 50 Zm.5401.2.A1_at AY104186.1 hypothetical protein LOC100274064 - 9e-121 At1g53750 RPT1A (REGULATORY PARTICLE TRIPLE-A 1A) C.G. S.X.
0.02 2e-5 50 Zm.5244.1.A1_at CD446539 60S ribosomal protein L9 - 4e-20 At1g33120 60S ribosomal protein L9 (RPL90B) C.G. S.X.
0.01 2e-5 50 Zm.2754.1.A1_at AY104118.1 - - 4e-53 At4g19210 ATRLI2 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.26 1e-29 131 Arabidopsis thaliana At3g55620 824728 emb1624 (embryo defective 1624) F:ribosome binding, translation initiation factor activity;P:embryonic development ending in seed dormancy, translational initiation;C:nucleolus;AOMFP - - - C.G. S.X.
0.46 8e-66 252 Glycine max Gma.2238.1.S1_at BM893125 - - 4e-76 At3g55620 emb1624 (embryo defective 1624) C.G. S.X.
0.52 0 805 Hordeum vulgare Contig3507_at Contig3507 - - 1e-66 At3g55620 emb1624 (embryo defective 1624) C.G. S.X.
0.54 0 640 Oryza sativa Os07g0639800 AK104739.1 - - 3e-33 At3g55620 emb1624 (embryo defective 1624) C.G. S.X.
0.45 2e-69 264 Populus trichocarpa Ptp.5009.1.S1_s_at CV255944 hypothetical protein - 6e-50 At3g55620 emb1624 (embryo defective 1624) C.G. S.X.
0.49 0 749 Triticum aestivum Ta.2353.1.S1_at CK211722 - - 6e-63 At3g55620 emb1624 (embryo defective 1624) C.G. S.X.
0.32 9e-22 103 Vitis vinifera 1614732_at BQ800054 hypothetical protein LOC100254404 - 5e-29 At3g55620 emb1624 (embryo defective 1624) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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