Gene omics information

Query gene ID	Zm.7094.2.S1_at
Gene name	60S ribosomal protein L7a
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	81.1	Zm.7094.2.S1_at	CA403709	60S ribosomal protein L7a	-	3e-80	At3g62870	60S ribosomal protein L7A (RPL7aB)	S.X.	H.G.	Please select
0.61	79.5	Zm.10332.1.A1_a_at	BQ048110	-	-	2e+0	At3g28990	unknown protein	S.X.	H.G.	Please select
0.48	61.3	Zm.1820.1.S1_at	CF009592	-	-	2e-3	At5g46780	VQ motif-containing protein	S.X.	H.G.	Please select
0.46	58.4	Zm.11960.1.A1_at	BM382185	-	-	9e-1	At1g68260	thioesterase family protein	S.X.	H.G.	Please select
0.40	48.5	Zm.5935.1.A1_at	CF633631	hypothetical protein LOC100194239	-	2e+0	At3g12260	complex 1 family protein / LVR family protein	S.X.	H.G.	Please select
0.40	48.5	Zm.6390.1.S1_at	BU098381	hypothetical protein LOC100277409	-	8e+0	At5g26070	hydroxyproline-rich glycoprotein family protein	S.X.	H.G.	Please select
0.35	38.9	Zm.3487.1.A1_at	CK986046	arabinogalactan protein	-	4e-14	At5g11680	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.3	94.7	GSM205371	Mo17xB73 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.3	94.7	GSM205375	Mo17xB73 13 DAP endosperm tissue biological replicate 3	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.2	94.5	GSM205365	Mo17 13 DAP endosperm tissue biological replicate 1	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.0	94.0	GSM205369	Mo17 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.9	93.8	GSM205373	Mo17 13 DAP endosperm tissue biological replicate 3	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.8	93.5	GSM253245	ZM_12h_Mock_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
2.7	93.2	GSM258535	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 3	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
2.6	92.9	GSM205370	B73 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.6	92.9	GSM258537	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 4	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
2.5	92.6	GSM258531	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 1	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.75	0	1239	Zm.7094.1.A1_a_at	AW054223	60S ribosomal protein L7a	-	5e-69	At3g62870	60S ribosomal protein L7A (RPL7aB)	C.G.	S.X.	Please select
0.75	0	1239	Zm.7094.1.A1_x_at	AW054223	60S ribosomal protein L7a	-	5e-69	At3g62870	60S ribosomal protein L7A (RPL7aB)	C.G.	S.X.	Please select
0.61	0	862	Zm.6052.1.A1_at	AI759036	hypothetical protein LOC100191190	-	1e-57	At2g47610	60S ribosomal protein L7A (RPL7aA)	C.G.	S.X.	Please select
0.02	3e-1	36	Zm.10787.1.A1_at	CF625193	hypothetical protein LOC100274116	-	2e-13	At3g55000	TON1A (TONNEAU 1)	C.G.	S.X.	Please select
0.01	1e+0	34	ZmAffx.12.1.S1_at	AY562491.1	kaurene synthase2	-	1e-7	At4g02780	GA1 (GA REQUIRING 1)	C.G.	S.X.	Please select
0.02	1e+0	34	Zm.9418.1.S1_at	AF493799.1	DREB-like protein	-	4e-2	At2g35700	ERF38 (ERF FAMILY PROTEIN 38)	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.777.1.S1_a_at	CD442368	hypothetical protein LOC100272376	-	4e-8	At5g63380	4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein	C.G.	S.X.	Please select
0.02	1e+0	34	Zm.7535.1.A1_at	AY105427.1	cellular retinaldehyde-binding/triple function, C-terminal	-	8e+0	At5g03204	unknown protein	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.4650.1.S1_a_at	CA399108	formate dehydrogenase2	-	4e-15	At5g14780	FDH (FORMATE DEHYDROGENASE)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.45	3e-80	299	Arabidopsis thaliana	At3g62870	825462	60S ribosomal protein L7A (RPL7aB)	F:structural constituent of ribosome;P:translation;C:cytosolic ribosome, cytosolic large ribosomal subunit, plasma membrane, membrane;MOFAP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.38	6e-57	222	Glycine max	Gma.16192.1.S1_at	BG507769	-	-	2e-58	At2g47610	60S ribosomal protein L7A (RPL7aA)	C.G.	S.X.	Please select
0.60	0	924	Hordeum vulgare	Contig2001_at	Contig2001	-	-	4e-76	At3g62870	60S ribosomal protein L7A (RPL7aB)	C.G.	S.X.	Please select
0.63	0	1005	Oryza sativa	Os09g0507800	AK061725.1	-	60S ribosomal protein L7a	2e-86	At3g62870	60S ribosomal protein L7A (RPL7aB)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.43	3e-71	270	Populus trichocarpa	PtpAffx.3289.3.S1_at	CF230543	hypothetical protein	-	5e-69	At3g62870	60S ribosomal protein L7A (RPL7aB)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.58	0	852	Triticum aestivum	Ta.19269.1.S1_x_at	CD918341	-	-	4e-73	At3g62870	60S ribosomal protein L7A (RPL7aB)	C.G.	S.X.	Please select
0.34	9e-62	236	Vitis vinifera	1607854_at	CB978814	hypothetical protein LOC100255902	-	1e-75	At3g62870	60S ribosomal protein L7A (RPL7aB)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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