CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.7048.1.A1_at

Gene name hypothetical protein LOC100194145

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.7048.1.A1_at AI677399 hypothetical protein LOC100194145 - 6e-7 At4g30996 unknown protein S.X. H.G.
0.67 85.8 Zm.7049.1.A1_at AW331717 huntingtin interacting protein K - 4e-13 At3g06610 DNA-binding enhancer protein-related S.X. H.G.
0.55 71.6 Zm.7051.1.S1_at AI833408 hypothetical protein LOC100277200 - 1e+0 At5g61997 unknown protein S.X. H.G.
0.31 31.6 Zm.7128.1.A1_a_at BM333224 hypothetical protein LOC100276381 - 2e+0 At5g25290 F-box family protein S.X. H.G.
0.30 29.8 Zm.5824.1.A1_at AI649789 - - 2e+0 At5g10680 calmodulin-binding protein-related S.X. H.G.
0.20 14.2 Zm.353.1.S1_at CF636600 profilin - 2e-12 At4g29350 PFN2 (PROFILIN 2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.1 95.9 GSM206287 Left pulvinus control total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.8 95.5 GSM206304 Upper pulvinus 60 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.8 95.5 GSM206309 Lower pulvinus 30 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.6 95.2 GSM206293 Right pulvinus control total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.5 95.1 GSM206329 Right pulvinus control polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.4 94.9 GSM206323 Left pulvinus control polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.4 94.9 GSM206310 Lower pulvinus 60 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.3 94.7 GSM290556 CCR mutant M2 with array type maize from Affymetrix GSE11531 Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
3.2 94.5 GSM206307 Lower pulvinus 5 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.2 94.5 GSM206308 Lower pulvinus 15 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 6e-2 38 Zm.19054.1.A1_at CO534445 bile acid sodium symporter/ transporter - 3e+0 At5g03660 unknown protein C.G. S.X.
0.02 2e-1 36 Zm.9742.1.A1_at BU099018 hypothetical protein LOC100274643 - 3e+0 At5g01380 transcription factor C.G. S.X.
0.02 2e-1 36 Zm.8153.1.S1_at BM073105 - - 3e-1 At5g61030 GR-RBP3 (glycine-rich RNA-binding protein 3) C.G. S.X.
0.02 2e-1 36 Zm.7056.6.A1_at CF051906 RWD domain-containing protein 1 - 1e-2 At3g52550 - C.G. S.X.
0.02 2e-1 36 Zm.5763.1.S1_at AI649479 mitochondrion protein - 1e-7 At3g51090 - C.G. S.X.
0.02 2e-1 36 Zm.4469.1.S1_at AI734281 hypothetical protein LOC100277258 - 6e+0 At4g25200 ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6) C.G. S.X.
0.02 2e-1 36 Zm.4269.1.S1_at AY111618.1 hypothetical protein LOC100194366 - 2e+0 At5g38895 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.01 2e-1 36 Zm.1705.1.S1_at AW400006 hexose transporter - 2e-4 At4g35300 TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) C.G. S.X.
0.01 2e-1 36 Zm.156.1.A1_at L06478.1 opaque2 heterodimerizing protein2 - 1e-2 At3g54620 BZIP25 (BASIC LEUCINE ZIPPER 25) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 6e-7 56 Arabidopsis thaliana At4g30996 829226 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO - - - C.G. S.X.
0.03 7e-1 36 Glycine max PsAffx.CL2297Contig1_at PsAffx.CL2297Contig1 - - 9e-1 At1g06475 unknown protein C.G. S.X.
0.25 8e-54 210 Hordeum vulgare Contig16340_at Contig16340 - - 6e-3 At2g24290 unknown protein C.G. S.X.
0.33 1e-70 268 Oryza sativa Os04g0501800 CA764882 - Protein of unknown function DUF1068 family protein 6e-3 At2g24290 unknown protein C.G. S.X.
0.04 2e-1 38 Populus trichocarpa PtpAffx.212807.1.S1_x_at pmrna25061 hypothetical protein - 7e-2 At1g75550 glycine-rich protein C.G. S.X.
0.37 1e-51 204 Triticum aestivum Ta.6349.2.S1_at CA643047 - - 4e-3 At2g24290 unknown protein C.G. S.X.
0.03 2e-3 42 Vitis vinifera 1607423_at CF215834 hypothetical protein LOC100256881 - 1e-11 At2g32580 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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