CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.7045.1.A1_at

Gene name protein pob

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 88.2 Zm.7045.1.A1_at AY108667.1 protein pob - 2e-37 At4g12590 unknown protein S.X. H.G.
0.67 85.8 Zm.12595.1.S1_at BG266819 - - 1e-7 At1g09620 ATP binding / aminoacyl-tRNA ligase/ leucine-tRNA ligase/ nucleotide binding S.X. H.G.
0.67 85.8 Zm.18125.1.S1_at CN844337 - - 4e-1 At3g47380 invertase/pectin methylesterase inhibitor family protein S.X. H.G.
0.53 69.1 Zm.10287.1.S1_at BM736731 - - 1e+0 At2g45250 unknown protein S.X. H.G.
0.43 52.8 Zm.2678.1.A1_at BM339111 hypothetical protein LOC100193236 - 2e-1 At1g05180 AXR1 (AUXIN RESISTANT 1) S.X. H.G.
0.40 48.5 Zm.12736.2.A1_at AI881252 - - 5e+0 At4g25720 QC (GLUTAMINYL CYCLASE) S.X. H.G.
0.35 38.9 Zm.737.2.A1_at AI746142 - - 4e-6 At5g60360 AALP (Arabidopsis aleurain-like protease) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.9 95.7 GSM290554 WS2 with array type maize from Affymetrix GSE11531 Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
3.6 95.2 GSM290555 CCR mutant M1 with array type maize from Affymetrix GSE11531 Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
3.6 95.2 GSM253273 ZM_4.5d_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
3.5 95.1 GSM290553 WS1 with array type maize from Affymetrix GSE11531 Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
3.3 94.7 GSM253272 ZM_4.5d_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
3.1 94.3 GSM253271 ZM_4.5d_SG200_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
3.0 94.0 GSM290556 CCR mutant M2 with array type maize from Affymetrix GSE11531 Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
2.7 93.2 GSM253279 ZM_8d_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
2.6 92.9 GSM253277 ZM_8d_SG200_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
2.5 92.6 GSM253278 ZM_8d_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 6e-2 38 Zm.10134.1.A1_at BQ619055 glutathione S-transferase - 1e-1 At2g14260 PIP C.G. S.X.
0.01 3e-1 36 Zm.2273.1.S1_at AW330980 hypothetical protein LOC100272874 - 7e-1 At5g61230 ankyrin repeat family protein C.G. S.X.
0.01 3e-1 36 Zm.19014.1.S1_at BU092440 hypothetical protein LOC100272410 - 2e-14 At1g08700 presenilin family protein C.G. S.X.
0.01 3e-1 36 Zm.1335.1.S1_at CA828353 presenilin - 7e-17 At1g08700 presenilin family protein C.G. S.X.
0.02 1e+0 34 Zm.4616.2.A1_at CF637845 Hypothetical protein LOC100193318 - 9e-1 At3g25980 mitotic spindle checkpoint protein, putative (MAD2) C.G. S.X.
0.02 1e+0 34 Zm.4616.1.A1_a_at BQ538201 hypothetical protein LOC100193318 - 1e+0 At3g25980 mitotic spindle checkpoint protein, putative (MAD2) C.G. S.X.
0.02 1e+0 34 Zm.4616.1.A1_x_at BQ538201 hypothetical protein LOC100193318 - 1e+0 At3g25980 mitotic spindle checkpoint protein, putative (MAD2) C.G. S.X.
0.02 1e+0 34 Zm.4015.2.A1_at CD435491 hypothetical protein LOC100192652 - 2e-15 At3g02630 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative C.G. S.X.
0.01 1e+0 34 Zm.3618.2.S1_a_at CF629424 glutathione synthetase - 1e-5 At5g27380 GSH2 (GLUTATHIONE SYNTHETASE 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.33 2e-37 157 Arabidopsis thaliana At4g12590 826872 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion, endoplasmic reticulum;MFOP - - - C.G. S.X.
0.21 3e-37 157 Glycine max Gma.8031.1.S1_at BE823105 - - 4e-76 At4g12590 unknown protein C.G. S.X.
0.54 0 769 Hordeum vulgare Contig5182_at Contig5182 - - 9e-34 At4g12590 unknown protein C.G. S.X.
0.54 0 741 Oryza sativa Os09g0497400 AK068677.1 - Eukaryotic protein of unknown function DUF850family protein 5e-32 At4g12590 unknown protein C.G. S.X.
0.25 4e-49 196 Populus trichocarpa PtpAffx.6864.1.S1_at CN550052 hypothetical protein - 2e-96 At4g12590 unknown protein C.G. S.X.
0.53 0 765 Triticum aestivum Ta.6467.1.S1_a_at CK194906 - - 1e-35 At4g12590 unknown protein C.G. S.X.
0.34 2e-35 149 Vitis vinifera 1613866_s_at CF510932 hypothetical protein LOC100245100 - 2e-68 At4g12590 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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