Gene omics information

Query gene ID	Zm.704.1.S1_at
Gene name	xyloglucan endotransglycosylase homolog1
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.704.1.S1_at	U15781.1	xyloglucan endotransglycosylase homolog1	-	3e-6	At5g57550	XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)	S.X.	H.G.	Please select
0.73	89.9	Zm.2856.1.A1_at	AW076433	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1	-	9e-34	At2g35620	FEI2 (FEI 2)	S.X.	H.G.	Please select
0.63	81.1	Zm.3966.1.A1_at	AI795713	-	-	5e-2	At1g56310	3'-5' exonuclease domain-containing protein	S.X.	H.G.	Please select
0.57	75.1	Zm.18251.1.A1_at	CN845321	-	-	5e-3	At5g66080	protein phosphatase 2C family protein / PP2C family protein	S.X.	H.G.	Please select
0.40	48.5	Zm.11965.1.A1_at	BM382230	hypothetical protein LOC100275559	-	2e+0	At1g06070	bZIP transcription factor, putative (bZIP69)	S.X.	H.G.	Please select
0.33	36.0	Zm.15807.1.A1_at	AY111212.1	-	-	1e+0	At4g19590	DNAJ heat shock N-terminal domain-containing protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
32.6	99.8	GSM320442	protocol: mRNA - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
29.7	99.8	GSM320441	protocol: mRNA - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.3	99.5	GSM320444	protocol: mRNA - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.8	99.4	GSM320443	protocol: mRNA - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.2	99.1	GSM253270	ZM_4.5d_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
12.9	98.7	GSM253269	ZM_4.5d_Mock_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
11.8	98.6	GSM253268	ZM_4.5d_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
7.6	97.9	GSM320440	protocol: mRNA - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9	97.3	GSM202402	Zmet2 study 11-day seedling aerial tissue genotype Mo17 Rep1	GSE8188	Expression profiling of zmet2-m1 mutants relative to wild-type
5.3	96.9	GSM202410	Zmet2 study 11-day seedling aerial tissue genotype Mo17 Rep3	GSE8188	Expression profiling of zmet2-m1 mutants relative to wild-type

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.22	2e-29	129	Zm.8890.1.S1_a_at	BM379881	hypothetical protein LOC100191584	-	1e-8	At4g25820	XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)	C.G.	S.X.	Please select
0.11	1e-15	83	Zm.6419.1.A1_at	CF635415	xyloglucan endotransglucosylase/hydrolase	-	3e-6	At5g13870	EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4)	C.G.	S.X.	Please select
0.12	2e-11	69	Zm.14507.1.A1_a_at	CO524101	glycosyl hydrolases family 16 protein	-	1e-2	At1g11545	xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative	C.G.	S.X.	Please select
0.12	2e-11	69	Zm.14507.1.A1_x_at	CO524101	glycosyl hydrolases family 16 protein	-	1e-2	At1g11545	xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative	C.G.	S.X.	Please select
0.03	7e-5	48	Zm.7008.1.A1_at	AY106262.1	xyloglucan endotransglycosylase/hydrolase protein 8	-	7e-1	At1g18210	calcium-binding protein, putative	C.G.	S.X.	Please select
0.03	7e-5	48	Zm.7008.1.A1_s_at	AY106262.1	xyloglucan endotransglycosylase/hydrolase protein 8	-	7e-1	At1g18210	calcium-binding protein, putative	C.G.	S.X.	Please select
0.02	3e-4	46	Zm.8890.2.A1_at	CA829436	Hypothetical protein LOC100191584	-	1e-1	At4g14130	XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)	C.G.	S.X.	Please select
0.06	1e-3	44	Zm.5637.1.A1_at	BM079527	hypothetical protein LOC100217032	-	3e+0	At3g50250	unknown protein	C.G.	S.X.	Please select
0.03	1e-3	44	Zm.19221.1.S1_at	CO524032	-	-	5e-8	At1g11545	xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	3e-6	54	Arabidopsis thaliana	At5g57550	835859	XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)	xyloglucan endotransglycosylase-related protein (XTR3)	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	6e-2	40	Glycine max	Gma.8236.1.S1_at	BE659468	-	-	5e-20	At4g30270	MERI5B (meristem-5)	C.G.	S.X.	Please select
0.37	3e-115	414	Hordeum vulgare	Contig2672_at	Contig2672	xyloglucan xyloglucosyl transferase	-	2e-3	At4g25810	XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)	C.G.	S.X.	Please select
0.35	1e-142	508	Oryza sativa	Os06g0696600	AK105934.1	-	Xyloglucan endo-transglycosylase homolog	9e-3	At4g25810	XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	2e-1	38	Populus trichocarpa	PtpAffx.56651.1.A1_at	CV236471	hypothetical protein	-	8e-12	At5g57560	TCH4 (Touch 4)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.32	1e-110	400	Triticum aestivum	Ta.14995.1.S1_x_at	CA718825	-	-	2e-3	At4g30270	MERI5B (meristem-5)	C.G.	S.X.	Please select
0.06	2e-4	46	Vitis vinifera	1619068_at	CF215954	hypothetical protein LOC100250461	-	1e-13	At4g14130	XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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