CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.7016.1.A1_at

Gene name

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 85.8 Zm.7016.1.A1_at AY103859.1 - - 3e-1 At5g44610 MAP18 (Microtubule-associated Protein 18) S.X. H.G.
0.80 94.0 ZmAffx.1142.1.A1_at AW399873 - - 2e+0 At5g47550 cysteine protease inhibitor, putative / cystatin, putative S.X. H.G.
0.71 88.2 Zm.17818.1.A1_at CK145213 - - 6e+0 At5g52470 FIB1 (FIBRILLARIN 1) S.X. H.G.
0.61 79.5 Zm.7830.1.S1_at BM080060 nucleic acid binding protein - 4e-1 At2g03190 ASK16 (ARABIDOPSIS SKP1-LIKE 16) S.X. H.G.
0.16 9.4 Zm.7016.1.A1_a_at AY103859.1 hypothetical protein LOC100275203 /// hypothetical protein LOC100276238 - 3e-1 At5g44610 MAP18 (Microtubule-associated Protein 18) S.X. H.G.
0.15 8.6 Zm.1094.1.A1_at BM339500 - - 2e-5 At5g26210 AL4 (ALFIN-LIKE 4) S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.0 95.8 GSM253278 ZM_8d_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
4.0 95.8 GSM253269 ZM_4.5d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
3.8 95.5 GSM320442 protocol: mRNA - genotype: Mo17 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.8 95.5 GSM320446 protocol: mRNA - genotype: CML69 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.5 95.1 GSM253270 ZM_4.5d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
3.4 94.9 GSM253281 ZM_8d_SG200_3Alu_II GSE10023 Maize gene expression during infection with Ustilago maydis
3.3 94.7 GSM320441 protocol: mRNA - genotype: Mo17 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.3 94.7 GSM253279 ZM_8d_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
3.2 94.5 GSM253268 ZM_4.5d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
3.1 94.3 GSM253282 ZM_8d_SG200_3Alu_III GSE10023 Maize gene expression during infection with Ustilago maydis
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 1185 Zm.7016.1.A1_a_at AY103859.1 hypothetical protein LOC100275203 /// hypothetical protein LOC100276238 - 3e-1 At5g44610 MAP18 (Microtubule-associated Protein 18) C.G. S.X.
1.00 0 1185 Zm.7016.1.A1_x_at AY103859.1 hypothetical protein LOC100276238 - 3e-1 At5g44610 MAP18 (Microtubule-associated Protein 18) C.G. S.X.
1.00 0 1185 Zm.7016.1.S1_at AY103859.1 - - 3e-1 At5g44610 MAP18 (Microtubule-associated Protein 18) C.G. S.X.
0.57 8e-142 502 Zm.7016.2.A1_x_at CF626808 - - 5e+0 At1g54500 rubredoxin family protein C.G. S.X.
0.57 8e-142 502 Zm.7016.2.A1_at CF626808 - - 5e+0 At1g54500 rubredoxin family protein C.G. S.X.
0.44 2e-59 228 Zm.17115.1.S1_at CN844978 - - 1e+0 At5g67490 unknown protein C.G. S.X.
0.12 2e-15 81 Zm.5778.1.A1_at BG873747 hypothetical protein LOC100275690 - 1e-1 At5g11680 unknown protein C.G. S.X.
0.08 4e-11 67 Zm.2171.1.A1_at BG841205 - - 1e+0 At1g74970 RPS9 (RIBOSOMAL PROTEIN S9) C.G. S.X.
0.03 1e-1 36 Zm.9422.1.A1_at BM268752 hypothetical protein LOC100279301 - 7e-2 At5g07600 oleosin / glycine-rich protein C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-1 36 Arabidopsis thaliana At5g44610 834489 MAP18 (Microtubule-associated Protein 18) Encodes a protein of unknown function with seven repeated VEEKK motifs. RNAi and overexpression experiments suggest that the gene is not involved in cell division but might be consequential for cell shape of epidermal and cortical cells. The protein encoded by this gene binds to cortical microtubules and inhibits tubulin polymerization. - - - C.G. S.X.
0.03 2e+0 34 Glycine max PsAffx.CL1302Contig1_s_at PsAffx.CL1302Contig1 - - 2e+1 At5g19480 unknown protein C.G. S.X.
0.27 6e-47 186 Hordeum vulgare Contig4029_x_at Contig4029 - - 3e+0 At5g22080 DNAJ heat shock N-terminal domain-containing protein C.G. S.X.
0.20 7e-50 198 Oryza sativa Os06g0143100 AK061597.1 - Hypothetical protein 4e+0 At3g18510 unknown protein C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.211108.1.S1_s_at pmrna21824 f-box family protein - 2e+0 At4g39190 unknown protein C.G. S.X.
0.76 0 688 Triticum aestivum TaAffx.85738.1.S1_at CA620072 - - 2e-1 At5g44610 MAP18 (Microtubule-associated Protein 18) C.G. S.X.
0.09 2e-6 52 Vitis vinifera 1620549_s_at CF206023.1 - - 4e+0 At4g14358 - C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage