CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.6975.1.S1_at

Gene name hypothetical protein LOC100272316

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.6975.1.S1_at AW066660 hypothetical protein LOC100272316 - 4e-40 At3g20050 ATTCP-1 S.X. H.G.
0.50 65.7 Zm.3818.1.S1_at CF034965 - - 2e-1 At1g77570 DNA binding / transcription factor S.X. H.G.
0.50 65.7 Zm.4560.2.S1_at AY106577.1 - - 2e-11 At3g59350 serine/threonine protein kinase, putative S.X. H.G.
0.33 36.0 Zm.10162.1.A1_at AW155725 - - 3e-1 At3g57230 AGL16 (AGAMOUS-LIKE 16) S.X. H.G.
0.27 24.6 Zm.14149.1.A1_at AY111524.1 - - 1e+0 At5g55135 unknown protein S.X. H.G.
0.22 16.9 Zm.8378.1.A1_at BM073885 hypothetical protein LOC100273227 - 6e+0 At3g26860 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.7 97.2 GSM205375 Mo17xB73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.4 97.0 GSM205371 Mo17xB73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.8 96.6 GSM205373 Mo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.6 96.4 GSM205374 B73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.4 96.2 GSM205369 Mo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.2 96.0 GSM205370 B73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.0 95.8 GSM205367 Mo17xB73 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.8 95.5 GSM202310 B73 19 day after pollination embryo tissue, biological replicate 1 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.6 95.2 GSM205365 Mo17 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.6 95.2 GSM205366 B73 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 1e-1 38 Zm.6883.1.S1_at CN844698 small nuclear ribonucleoprotein E - 2e-2 At4g30330 small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putative C.G. S.X.
0.01 2e+0 34 Zm.5118.1.A1_at CF636912 peptidyl-tRNA hydrolase 2 - 3e-21 At3g03010 aminoacyl-tRNA hydrolase C.G. S.X.
0.01 2e+0 34 Zm.12796.1.A1_at CA403456 hypothetical protein LOC100276862 - 2e-7 At1g07040 unknown protein C.G. S.X.
0.01 2e+0 34 Zm.12608.1.A1_at CD443302 hypothetical protein LOC100191580 - 7e-32 At5g01460 LMBR1 integral membrane family protein C.G. S.X.
0.01 7e+0 32 Zm.9115.1.A1_at CO525291 hypothetical protein LOC100273230 - 2e+0 At5g51650 unknown protein C.G. S.X.
0.01 7e+0 32 Zm.7674.1.A1_at BM268596 hypothetical protein LOC100273721 - 1e-19 At5g19920 transducin family protein / WD-40 repeat family protein C.G. S.X.
0.01 7e+0 32 Zm.6601.2.A1_at BM078978 hypothetical protein LOC100191456 - 1e-17 At3g18190 chaperonin, putative C.G. S.X.
0.01 7e+0 32 Zm.6601.1.S1_at BI361125 - - 6e-30 At3g18190 chaperonin, putative C.G. S.X.
0.01 7e+0 32 Zm.6601.2.A1_a_at BM078978 hypothetical protein LOC100191456 - 1e-17 At3g18190 chaperonin, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.35 4e-40 167 Arabidopsis thaliana At3g20050 821544 ATTCP-1 Encodes a putative cytoplasmic chaperonin that is similar to mouse Tcp-1 (t complex polypeptide 1). - - - C.G. S.X.
0.22 7e-15 83 Glycine max Gma.3183.3.S1_at BU964617 - - 3e-16 At3g20050 ATTCP-1 C.G. S.X.
0.68 0 1386 Hordeum vulgare Contig3654_s_at Contig3654 - - 2e-36 At3g20050 ATTCP-1 C.G. S.X.
0.70 0 1701 Oryza sativa Os04g0551800 AK121568.1 - T-complex protein 1, alpha subunit (TCP-1-alpha)(CCT-alpha) 4e-40 At3g20050 ATTCP-1 C.G. S.X.
0.59 4e-118 426 Populus trichocarpa PtpAffx.202134.1.S1_at pmrna4263 hypothetical protein - 1e-101 At3g20050 ATTCP-1 C.G. S.X.
0.67 0 1308 Triticum aestivum Ta.28393.1.S1_a_at BG607691 - - 1e-37 At3g20050 ATTCP-1 C.G. S.X.
0.39 3e-84 311 Vitis vinifera 1616103_at CF209493 hypothetical protein LOC100249575 - 1e-138 At3g20050 ATTCP-1 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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